Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1954 ATGTCTGAATTGGTGGCCCGTACGGGCCGGCATCAGCAGCGGTACGAGAACGGTTACCGTCTTGTTTCCGGGTGTGTTCCATTTAGATATAAAAGTTCTAATGATTGTGGAGACTCTAGTTCCGAGAAGATTGTTGAAGTGCTTATGATTAATTCACCAAGCGGACCTGGTCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGACGAAACTGTTGAGCAGGCAGCTGTAAGGGAAGCTGTAGAAGAAGCAGGAGTTCGAGGAGACATAATGGATTTTCTTGGACACTACGAGTTTAGGAGTAAGACCCATCAAGATGAGTTTAGTCCAGAAGGTTTATGTAAAGCAGCAATGTTTGCTTTATTTGTTAAGGAGGAACTTGAGTTATGGCCTGAACAAAGTACCAGAAATAGGAGATGGCTAGCTGTTTCGGAAGCCCTTGGAAGCCTCCGGCATGCATGGATGAGGGACGCCCTGGAATGCTTCTGTAAATGGCAAGAGGATAAGTTGGCGAATGGAACGAAAGAATAA 528 0.4545 MSELVARTGRHQQRYENGYRLVSGCVPFRYKSSNDCGDSSSEKIVEVLMINSPSGPGLLFPKGGWENDETVEQAAVREAVEEAGVRGDIMDFLGHYEFRSKTHQDEFSPEGLCKAAMFALFVKEELELWPEQSTRNRRWLAVSEALGSLRHAWMRDALECFCKWQEDKLANGTKE* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1954 175 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Gso15g1954 175 SUPERFAMILY Nudix 11 163 IPR015797 -
Gso15g1954 175 Pfam NUDIX domain 47 156 IPR000086 -
Gso15g1954 175 ProSiteProfiles Nudix hydrolase domain profile. 18 162 IPR000086 -
Gso15g1954 175 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 163 - -
Gso15g1954 175 CDD Nudix_Hydrolase_9 21 155 - -
Gso15g1954 175 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 173 - -
Gso15g1954 175 PANTHER OS03G0810300 PROTEIN 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1954 Gso-Chr15 43761636 43766221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1954 K07766 - gmx:100786569 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1954 15 43761636 43766221 Gso11g2269 11 38497322 38501629 GST