Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1948 ATGCAAAACCTTAGTCGCATGGACAAGCCAAAAACCATCACACACTACGTGTTGATAAGCTCCGCCGACGATACTGTCGCTGGTTTCACGAGCACTCTCGCCAAGTCCCTGGAAGACCAGGGATTCCCGGCGAGAGTGCTCGTGGACCACCGCGACCTGAAGAAAGCGGAGATTGAGACAGTGAGGGTGTTCATCGTTGTGTTGTCCGAACACTATGCAATTTGTCCGTTTCGGTTGGATAAGCTGGCCGAGATCGTGGATGGGTTAGGTGCCCGGCAGCGGGTTCTCCCGGTGTTCTACTATGTGCCCACGTCTGATGTGCGGTATCAGACTGGTAGCTATGAAGTAGCATTGGGTGTTCATGAGTACTATGTTGAACGTGAGAGGTTGGAGAAATGGAAGAACACTTTGGAAAAAGTTGCTGGCTTTGGCGGCTGGCCCCTCCAACGGACTGGGAAGACATATGAATACCAGTATATCGAGGAGATTGGTAGGAAGGTCTCTGAACATGTTGCTTGCTCTGTTGAACTGCATTCTCGAGTGCAGAAAGTTAATGAACTTCTGTATTCTGAATCTGATGATGGTGGAGTCAAGATGGTTGGGATATGTGGAGAAGATGGAACAGGTAAAACAACAGTAGCTTGTGGAGTTTATTACTCCAATGCTGCTGGAAACAGGTTTGACTATTTTTGCTTTCTTGATAAGGTGGGAGAATGTTTAAGGAATCACGGATTTATAGGTCTCATAGGTATGCTTCTCTCTGGAATGATTGGTGACAGCAACAACAACAGTGATATCATGAAATTTGGAAATACAAACAAAGGAATGTCAATATTAAAGCGAAAATTCTTGAAAGAAGAAAAGAAACTTTTTTTAGTTCTTGAAGACATTTATGATGAAAAGCAATTGCAAGACATTGTTAGGCTAACTAACTGCTTTAGTTCTAACAGCAAAGTCGTCATTACAACTAAGGACAACTCTTTGCTACACCGTCATGAGATTAGATTGTACGAGGAGCATGTCAAGCAATTGAAGCAAGAAATCCAACCTGCCTCGAATGATGGAAGCATTTCAACAGATGGAATTGGGAGAAAGTACGGAGTATGGCATACAAGAAATCCAGCCTGCCTCAAATGA 1137 0.4415 MQNLSRMDKPKTITHYVLISSADDTVAGFTSTLAKSLEDQGFPARVLVDHRDLKKAEIETVRVFIVVLSEHYAICPFRLDKLAEIVDGLGARQRVLPVFYYVPTSDVRYQTGSYEVALGVHEYYVERERLEKWKNTLEKVAGFGGWPLQRTGKTYEYQYIEEIGRKVSEHVACSVELHSRVQKVNELLYSESDDGGVKMVGICGEDGTGKTTVACGVYYSNAAGNRFDYFCFLDKVGECLRNHGFIGLIGMLLSGMIGDSNNNSDIMKFGNTNKGMSILKRKFLKEEKKLFLVLEDIYDEKQLQDIVRLTNCFSSNSKVVITTKDNSLLHRHEIRLYEEHVKQLKQEIQPASNDGSISTDGIGRKYGVWHTRNPACLK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1948 378 ProSiteProfiles TIR domain profile. 11 171 IPR000157 GO:0007165
Gso15g1948 378 SMART till_3 14 143 IPR000157 GO:0007165
Gso15g1948 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 346 IPR027417 -
Gso15g1948 378 Pfam NB-ARC domain 180 346 IPR002182 GO:0043531
Gso15g1948 378 Gene3D - 14 167 IPR035897 -
Gso15g1948 378 Gene3D - 168 341 IPR027417 -
Gso15g1948 378 PRINTS Disease resistance protein signature 199 214 - -
Gso15g1948 378 PRINTS Disease resistance protein signature 284 298 - -
Gso15g1948 378 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 145 IPR035897 -
Gso15g1948 378 Coils Coil 334 354 - -
Gso15g1948 378 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 345 IPR044974 GO:0006952
Gso15g1948 378 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 345 - -
Gso15g1948 378 Pfam TIR domain 23 169 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1948 Gso-Chr15 43631239 43635770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1948 22 352 WRKY Transcription Factor Family AT4G12020 23.460 8.63e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1948 - - gsj:114386881 740.725