LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g1943	ATGCAATTTCTGCAGTTTCACATTTTGTTTTTAATATGCTTATGTTTAGCTAGCTCAAGCCTTTTTTGGTGGAACTTGTGTTTTGCTAAGAGAGGAATGATGGAGGAAATTCCTGGGAATGAAGAAGCTGCTGAGCCTCCAGCATCATCTCAATCACCTGCTGATGTGCCACATAATATGGAAACAGAACAAATGACTGCTACAAAGTATTCTATTATCAGTAGGAATGGGGTTGGGACCACAGGAAAACACTTACCTTTACTTGTGAATCTCTTTGTAGTTGTTGTTAATGTTCCAGACACAGTATTTTTCCAGTATAGTGTTTCTATTAACTTTGAAGATAAACGAGCTGTTGAAAGCAAGGGCATTGGGAGAAAAGTGATTGATAAGCTTTATCAAACATACTCTTCTGAACTTGGTTGCAAAAGATTTGTATATGATGGAGGGAAAACTTTGTACACAGTGGGTCCTTTGTCGCTAAATAAGTATGAGTTCAAAGTGTTGCTGGAGTTGCTGGAGAAATCATTTACAAAACGGTATGTCTTGTGTATGACTGTATTATTTGCATCATGTTTTATTTTTCCCTTAAATCTCACTGTTCCAACTCTAGCAGTAGTGCCTACAACCGAGAGTGCTGGTGCTAACGGAAGCCTTCATGAGGAAACTAAAAGAACCCCGTTATATTTTTCCCTTACACTATTTATTTTTTCTAGATGTGTCAACAACTGTTATCATAAAACCTGCACCTGTAATAGAATCCCGTTATATTGCCTGGGAAAAGGTGACAAACTTGTACATATGGTTCATGAATCTGCATTAATAATTGCCCGCGTTTTTTTTTTTCCAATTTTTGGTAATCTGTAG	864	0.3715	MQFLQFHILFLICLCLASSSLFWWNLCFAKRGMMEEIPGNEEAAEPPASSQSPADVPHNMETEQMTATKYSIISRNGVGTTGKHLPLLVNLFVVVVNVPDTVFFQYSVSINFEDKRAVESKGIGRKVIDKLYQTYSSELGCKRFVYDGGKTLYTVGPLSLNKYEFKVLLELLEKSFTKRYVLCMTVLFASCFIFPLNLTVPTLAVVPTTESAGANGSLHEETKRTPLYFSLTLFIFSRCVNNCYHKTCTCNRIPLYCLGKGDKLVHMVHESALIIARVFFFPIFGNL*	288

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso15g1943	287	Pfam	N-terminal domain of argonaute	85	171	IPR032474	-
	Gso15g1943	287	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 2C	64	172	-	-
	Gso15g1943	287	PANTHER	PROTEIN ARGONAUTE 6	64	172	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g1943	Gso-Chr15	43496873	43505040	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso15g1943	75	169	Eukaryotic Initiation Factors Gene Family	AT1G48410	38.542	5.97e-11	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso15g1943	K11593		-	gsj:114388383	535.413