Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1941 ATGGCAGCAGAAATGGTTGCTGGTGCTCTTGTTTCTACTTTCGTTCAGAAGACAATTGACAGTTTGGCTTCTCGTTTTGTGGACTACTTTCGTGGAAGAAAACTCAATAAGAAGCTGCTGAGCAAAATCAAGGTGAAGCTACTAGCCATCGATGTTCTTGCTGATGATGCTGAACTTAAGCAGTTCAGAGATGCACGTGTCAGAGATTGGCTTTTTATGGCCAAAGATGTAGTGTTTGAAGCAGAGGATCTCTTGGCTGATATAGACTATGAACTCTCCAAATGCCAAGTAGAAGCTGAATCCCAGCCCATTCTTAACCAGGTGAGCAATTTCTTCAGACCTTCTTCTTTGAGCTCTTTTGACAAGGAAATTGAATCAAGGATGGAACAAATCCTTGATGACCTGGATGATCTTGAAAGCCGAGGTGGTTATCTAGGTTTGACAAGGACCAGTGGTGTTGGGGTTGGATCAGGATCGGGTAGTAAAGTGTTAGAGAAATTGCCATCAGCATCTTCGGTGGTAGAAAGTGATATTTATGGCAGAGATGATGACAAAAAATTGATCTTGGACTGGATCACTTCTGACACTGATGAAAAGCTATCAATACTTTCTATCGTGGGCATGGGCGGGTTGGGTAAGACCACGCTTGCCCAACTTGTATACAATGACCCAAGAATAGTGAGTAAGTTTGATGTCAAAGCTTGGATCTGTGTTTCAGAGGAATTTGATGTTTTCAACGTATCAAGAGCAATTCTTGACACGATTACTGATTCGACTGATCATGGTAGAGAGCTAGAAATAGTTCAGAGAAGACTAAAAGAAAATTTGGCAGATAAAAAATTTCTCCTCGTTTTGGATGACATTTGGAACGAAAGCAGGCTTAAATGGGAAGCTGTGCAGAATGCTCTTGTTTGTGGAGCTCAGGGAAGTAAGATCCTTGTCACAACACGCAGTGAGGAAGTTGCTTCTACCATGAGGTCAAAAGAACACAAGCTGGAGCAATTACAAGAAGATTATTGCTGGCAATTGTTCGCAAAACATGCATTCAGAGATGATAATCTTCCACGAGATCCAGTATGCCCAGAGATTGGTAGGAAGATTGTTAAAAAATGTAAAGGACTTCCTCTGGCCTTGAAGTCAATGGGAAGTCTATTACACAACAAACCATTTGCCCGGGAATGGGAAAGCGTGTTGCAAAGTGAAATATGGGAATTAAAGGATAGTGGTATTGTTCCTGCTTTAGCATTGAGCTATCACCACCTTCCTCCCCATCTCAAGACATGCTTTGCTTACTGTGCTTTATTCCCCAAGGATTATGAGTTTGACAAGGAGTGTTTAATTCAGTTGTGGATGGCTGAAAATTTCCTACACTGCCATCAAGGCAGTAAGAGTCCAGAAGAAGTTGGCCAGCAGTACTTCAATGATTTACTATCAAGGTCCTTCTTTCAACAATCAAGCATATTTGAAGGATTTGTCATGCATGACCTTCTAAATGATTTGGCAAAATATGTTTGTGGGGACATCTATTTCAGGTTGAGAGTTGATCAAGCAAAATGTACACAGAAAACAACCCGTCATTTTTCAGTTTCAATGATTACGGAACGATATTTTGATGAGTTTGGAACTTCATGTGATACTAAAAAATTGCGTACATTTATGCCAACAAGCTGGAGAATGAATGAAAATCACTCGAGTTGGAATTGCAAGATGTCGATACATGAATTGTTCTCCAAGTTGAAGTTCTTACGCGTCTTATCTCTGTCTCACTGTTTAGACATTAAAGAGCTGCCTGACTCTGTTTGCAATTTTAAACATCTTCGTTGGTTAGACCTTTCCCATACTGACATTGAAAAACTACCTGAATCCACATGTTCACTCTACAACTTGCAAATACTGAAGTTGAATGATTGTAGACATTTGAGGGAGCTGCCCTCAAATTTGCATGAACTCACCAATTTGCATCGCCTTGAATTTGTAAATACTGAAATTATAAAGGTGCCACCGCATCTGGGAAAGCTGAAGAATCTTCAAGTATCCATGAGTTCTTTTCATGTTGGCAAACGTAGTGAGTTCACCATTCAGAAATTCGGAGAGCTCAATCTTCTTCATGAAAGATTATCATTTAGGGAGCTGCAGAATATTGAGAATCCCTCAGATGCATTAGCTGCAGATTTGAAAAATAAAACACACCTTGTGGAACTAGAGTTTGAATGGAATTCACACCGAAACCCTGATGATTCTGCCAAAGAAAGGGATGTAATTGTAATTGAGAATCTACAACCTTCCAAACACCTGAAGGAGTTATCAATCATCAACTATGGTGGTAAACAATTCCCAAATTGGTTATCCGATAATTCTTTATCAAATGTGGTGTCCTTAGAGTTGAACAACTGTCAATCTTGCCAACATTTGCCTTCCCTTGGACTTTTGCCATTTCTCAAGAACCTTAAGATTTCAAGTCTTGATGGGATAGTGAGCATTGGTGCTGATTTTTATGGTAATAGCACTTCTTCATTTCCATCGTTGGAAAGATTGAAGTTCTCCTCTATGAAAGCATGGAAAAAATGGGAATGTGAAGCTGTGACAGGTGCTTTTCCGTGTCTTCAATATCTTTCTATAAAGAAATGTCCAAAGCTGAAAGGTGACCTCCCAGAGCAACTTCTTCCTTTAAAGGAGCTAGAAATTAGTGACTGCAAACAACTTGAGGCTTCAGCTCCCAGGGCACTAAAACTAAACCTAGAAGACTTTGGAAAGCTGCAAATTGACTGGGCTTCTTTGAAAAAGCTCAGAATGGGCGGACACAGCATGGAAGCATCGTTGCTTGAAAAGTCTGATACTTTGAAAGAACTGGAAATTTATTGTTGCCCGAAACAGATGCAGCCTGGTGTAATGTTTTGCGATTGTGAAATGAGTGATGATGGCTGTGACTCTCTAAAGACTTTTCCGCTAGATTTCTTCCCAGCACTCACGATCCTTTTTCTCGGTGGCTTTCGTAATCTACAGATGATTACACAGGATCACACCCTTAATCATCTTGAAAGTCTGGGATTCGCTAACTGCCCTCAGTTAGAATCATTGCCTGGAAGCATGCATATACTGCTTCCATCTCTGAAGCAGCTAGTAATATATGATTGTCCAAGAGTTGAGTCGTTCCCTGAAGGAGGTTTGCCATCAAATCTTAAAGAGATGGGACTCTATAAATGCTCCTCCGGACTCATGGCCTCACTGAAAGGGGCTTTGGGAGACAATCCCCCTCTGAAAACCTTGGGGATAGGAAAGCTGGATGCGGAATCTTTTCCTGATGAAGGTTTACTGCCACTCTCTTCTATTAATCTAAGCATATATGGTTTTCGAAATCTGAAAAAACTGGACTACAAGGGGCTCTGTCAGCTCTCCTCTCTCAAGGAATTGAATATTATAGACTGCCCCAACCTCCAACAGCTACCCGAGGAGGGTCTTCCCAAATCCATTTCACATCTTGGTATTGGAGGCTGCCCCAACCTCAAGCAGCGATGCCAGAACCCAGAAGGCGAAGACTGGCCAAAGATTGCTCACATTCCAACCGTGAGTATTTGGTATGATAGTGATGCTGATTTGTAA 3600 0.4114 MAAEMVAGALVSTFVQKTIDSLASRFVDYFRGRKLNKKLLSKIKVKLLAIDVLADDAELKQFRDARVRDWLFMAKDVVFEAEDLLADIDYELSKCQVEAESQPILNQVSNFFRPSSLSSFDKEIESRMEQILDDLDDLESRGGYLGLTRTSGVGVGSGSGSKVLEKLPSASSVVESDIYGRDDDKKLILDWITSDTDEKLSILSIVGMGGLGKTTLAQLVYNDPRIVSKFDVKAWICVSEEFDVFNVSRAILDTITDSTDHGRELEIVQRRLKENLADKKFLLVLDDIWNESRLKWEAVQNALVCGAQGSKILVTTRSEEVASTMRSKEHKLEQLQEDYCWQLFAKHAFRDDNLPRDPVCPEIGRKIVKKCKGLPLALKSMGSLLHNKPFAREWESVLQSEIWELKDSGIVPALALSYHHLPPHLKTCFAYCALFPKDYEFDKECLIQLWMAENFLHCHQGSKSPEEVGQQYFNDLLSRSFFQQSSIFEGFVMHDLLNDLAKYVCGDIYFRLRVDQAKCTQKTTRHFSVSMITERYFDEFGTSCDTKKLRTFMPTSWRMNENHSSWNCKMSIHELFSKLKFLRVLSLSHCLDIKELPDSVCNFKHLRWLDLSHTDIEKLPESTCSLYNLQILKLNDCRHLRELPSNLHELTNLHRLEFVNTEIIKVPPHLGKLKNLQVSMSSFHVGKRSEFTIQKFGELNLLHERLSFRELQNIENPSDALAADLKNKTHLVELEFEWNSHRNPDDSAKERDVIVIENLQPSKHLKELSIINYGGKQFPNWLSDNSLSNVVSLELNNCQSCQHLPSLGLLPFLKNLKISSLDGIVSIGADFYGNSTSSFPSLERLKFSSMKAWKKWECEAVTGAFPCLQYLSIKKCPKLKGDLPEQLLPLKELEISDCKQLEASAPRALKLNLEDFGKLQIDWASLKKLRMGGHSMEASLLEKSDTLKELEIYCCPKQMQPGVMFCDCEMSDDGCDSLKTFPLDFFPALTILFLGGFRNLQMITQDHTLNHLESLGFANCPQLESLPGSMHILLPSLKQLVIYDCPRVESFPEGGLPSNLKEMGLYKCSSGLMASLKGALGDNPPLKTLGIGKLDAESFPDEGLLPLSSINLSIYGFRNLKKLDYKGLCQLSSLKELNIIDCPNLQQLPEEGLPKSISHLGIGGCPNLKQRCQNPEGEDWPKIAHIPTVSIWYDSDADL* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1941 1199 SUPERFAMILY L domain-like 492 910 - -
Gso15g1941 1199 Gene3D Ribonuclease Inhibitor 511 684 IPR032675 -
Gso15g1941 1199 PANTHER DISEASE RESISTANCE PROTEIN RP 17 1029 IPR044974 GO:0006952
Gso15g1941 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 432 IPR027417 -
Gso15g1941 1199 Pfam Rx N-terminal domain 11 102 IPR041118 -
Gso15g1941 1199 Gene3D - 335 416 IPR042197 -
Gso15g1941 1199 Gene3D - 14 136 - -
Gso15g1941 1199 Gene3D Ribonuclease Inhibitor 689 889 IPR032675 -
Gso15g1941 1199 Gene3D - 417 503 IPR036388 -
Gso15g1941 1199 Coils Coil 318 338 - -
Gso15g1941 1199 Gene3D Ribonuclease Inhibitor 908 1188 IPR032675 -
Gso15g1941 1199 Gene3D - 162 334 IPR027417 -
Gso15g1941 1199 PANTHER OS05G0414200 PROTEIN 17 1029 - -
Gso15g1941 1199 PRINTS Disease resistance protein signature 202 217 - -
Gso15g1941 1199 PRINTS Disease resistance protein signature 275 289 - -
Gso15g1941 1199 PRINTS Disease resistance protein signature 371 385 - -
Gso15g1941 1199 PRINTS Disease resistance protein signature 577 593 - -
Gso15g1941 1199 ProSiteProfiles Leucine-rich repeat profile. 605 626 IPR001611 GO:0005515
Gso15g1941 1199 Pfam NB-ARC domain 183 399 IPR002182 GO:0043531
Gso15g1941 1199 SUPERFAMILY L domain-like 974 1184 - -
Gso15g1941 1199 Coils Coil 121 141 - -
Gso15g1941 1199 CDD AAA 179 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1941 Gso-Chr15 43399971 43403953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1941 562 676 Miscellaneous Gene Families AT4G39270 38.136 5.13e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1941 - - gmx:100782324 1971.82