Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1938 ATGCTGCATCAAGCCATCAACTACTACATAAAGGAAGAAGCTGAAAACATTCAGTTGTTTCATCACTTGGGTTCAACCCTGGACCAAGATATTTGCTTGAATGCTGGTGGAGTAAGCAAGGAAAACTCATGTGCTTTGTGTGGGGAATGTGAGGAAAGAAGCAAGGGATTTGAGGCACAGGAAGAGGAACCCAGATGTAAAAGAAAGAAAAATGGGAATCAATCCAATGAAGCATCATTATCAGAGGAAGGTTTAGTAGAGCCACGGATTGTGATGCAAAGTTTTACAGATTCTGAAATAAATGGAGATGGCTTTCACTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAATATCAGATGTAATGTTCGCAAACATGTGGACATCATGCTTGCGGGTTAA 435 0.4092 MLHQAINYYIKEEAENIQLFHHLGSTLDQDICLNAGGVSKENSCALCGECEERSKGFEAQEEEPRCKRKKNGNQSNEASLSEEGLVEPRIVMQSFTDSEINGDGFHWRKYGQKVVKGNPYPRSYYRCTNIRCNVRKHVDIMLAG* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1938 144 ProSiteProfiles WRKY domain profile. 96 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g1938 144 MobiDBLite consensus disorder prediction 56 72 - -
Gso15g1938 144 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 139 IPR044810 GO:0003700
Gso15g1938 144 MobiDBLite consensus disorder prediction 56 83 - -
Gso15g1938 144 Pfam WRKY DNA -binding domain 103 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g1938 144 PANTHER WRKY TRANSCRIPTION FACTOR 33-RELATED 45 139 - -
Gso15g1938 144 SMART WRKY_cls 101 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g1938 144 SUPERFAMILY WRKY DNA-binding domain 94 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso15g1938 144 Gene3D WRKY domain 88 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1938 Gso-Chr15 43314261 43316236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1938 103 144 WRKY Transcription Factor Family AT2G38470 57.143 1.32e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso15g1938 WRKY 1.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1938 - - gsj:114386182 305.064