Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1913 ATGGCTTCAGAGAAGAAACTTTCGAACCCAATGAGGGAGATAAAAGTGCAGAAGCTCGTCCTCAATATCTCTGTTGGCGAGAGTGGAGATCGTCTCACCAGAGCCGCCAAGGTGTTGGAACAACTTAGTGGCCAAACCCCAGTGTTTTCCAAAGCACGGTACACTGTTCGTTCCTTTGGGATTAGAAGAAATGAGAAGATTGCATGCTATGTCACTGTCAGAGGTGACAAGGCAATGCAACTTTTGGAGAGTGGTTTGAAGGTGAAGGAATATGAACTTCTTAGAAGGAACTTCAGTGATACTGGTTGCTTCGGCTTTGGTATTCAGGAGCATATCGATTTGGGAATCAAGTATGATCCTTCAACTGGTATTTATGGAATGAATTTCTTTGTTGTACTGGAGCGTCCTGGCTATCGTGTCGGACGCCGCCGTAGGTGCAAGTCCCGTGTTGGAATTCAGCACCGTGTCACAAAGGAGGATGCTATGAAGTGGTTCCAGGTGAAATATGAGGGAGTGATCCTTAACAAGTCCCAGGCAATTGTTTAG 546 0.4597 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMNFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIV* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1913 181 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Gso15g1913 181 Gene3D - 2 177 IPR022803 -
Gso15g1913 181 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Gso15g1913 181 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 180 - -
Gso15g1913 181 Pfam Ribosomal protein L5 9 62 IPR031310 -
Gso15g1913 181 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 180 IPR002132 GO:0003735|GO:0005840|GO:0006412
Gso15g1913 181 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Gso15g1913 181 SUPERFAMILY RL5-like 8 173 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1913 Gso-Chr15 42242432 42244742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1913 1 181 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 94.475 1.62e-128 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1913 K02868 - gmx:100499863 340.502