Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1894 ATGGCAACAACATTTGGGGGTATTTTGTCCTCACAGAAAGACGCAAGAGACTGGGAAAATGTAATGGATTTTGAAATATGGGATCTTGCAGAGGAGGAAAGTAACATCCTCCAAACATTAAGATTGAGTTATAATCAGCTTCCTTCATACCTGAAGAGGTGTTTTGCATACTGCTCCATACTACCAAAAGGCTTTGAATTTGAGGAGAAAGAGATAGTGTTGCTATGGATGGCTGAAGGACTTTTAGAGCAAAAATCACAGAAGCAAATGGAAGATGTTGGCCATGAGTACTTTCAAGAGCTACTCTCTGCATCACTTTTTCAGAAGTCAAGTAGCAACAGATCATTGTATGTAATGCATGACCTTATAAATGATCTAGCTCAATGGGTGGCTGGAGAGTCCTGTTTCAAATTGGACAATAATTTTCAATCTCACAAACAAAAGAAAAAGAAAATTTCCAAAATGACTCGGTATGCATCATACGTTGGTGGTGAATATGATGGTATTCAAATGTTTCAGGCCTTTAAAGAAGCCAAGTCCTTAAGAACATTCCTCCCTCTAAAGCATCGAAGGCTAGAAGAATGGTCCTACATAACTAATCATGTTCCTTTTGAATTGTTACCTGAGTTAAGATGCTTGAGGGCATTATCATTGAGTGGATATTTCATCAGTAAGCTTCCAAATTCGGTTAGCAATTTGAATCTTCTACGCTACCTGAATCTTTCTTCGACTGACCTCAGACAGTTGCCAGAATCAATCTGCAGTCTATGCAATATGCAAACATTACTACTGAGAGATTGTTTTAATCTTGAAGAACTGCCATCAAACATGAGTGATTTGATCAACCTACGTCATCTAGATATCACCAGATCTCATTCTTTAACACGTATGCCACATGGTATTGGTAAATTGACACATCTTCAAACTTTGTCAAATTTTGTTGTAGGCTCAAGTGGGATAGGAGAATTGATGAAGCTGTCAAATATCCGAGGAGTACTTTCTGTGTCCAGGTTAGAGCATGTGACTGACACTCGAGAGGCAAGTGAAGCTATGATAAATAAAAAGGTAGGCATTGATGTGCTGAAATTGAAGTGGACTAGTTGTATGAATAATCAGTCACATACTGAAAGAGCAAAAGAAGTGCTTCAGATGCTACAACCTCACAAAAATCTTGCAAAGCTTACTATTAAGTGCTATGGTGGTACGAGTTTCCCAAAATGGATAGGAGATCCATCCTACAAGAGCCTAGTGTTCTTAAAGTTGAAAGATTGTGCACATTGTACATCTTTGCCGGCACTTGGAAACCTTCATGCCCTCAAAGAACTTTACATCATTGGAATGAAAGAAGTATGTTGTATCGATGGTGAGTTCTGTGGTAATGCTTGCTTAAGACCTTTTCCTTCCTTGGAGAGACTATACTTTATGGACATGGAAAAATGGGAAAATTGGTTCCTCTCAGATAACAATGAGCAGAATGACATGTTTTCTTCTTTGCAACAGCTTTTCATTGTGAAGTGTCCCAAACTTTTAGGTAAACTACCAGAAAATCTCCCTTCTCTCAAACATGTAATAGTTAAAGAATGTGAACAATTGCTGGTTACCATTTCAAGCCTTCCTGTGCTCTACAAACTAGAAATTGAAGGATGCAAAGGCTTGGTCCTTAATTGCGCAAATGAATTCAATTCACTGAATTCAATGTCTGTTTCCAGAATCTTGGAGTTCACATTCTTAATGGAGAGGTTAGTGCAGGCTTTCAAAACTGTAGAAGAACTCAAAATTGTCAGTTGTGCTCTTGATGAAACAGTTCTGAATGATTTATGGGTAAATGAGGTTTGGCTTGAGAAGAATCCACATGGTTTGTCATCTATTCTCAGATTAATTGAGATTAGAAATTGCAACATCATGAAATCTATACCTAAAGTACTAATGGTCAACAGCCATTTTCTCGAACGCTTGTACATATGTCACTGTGATTCCATAGTCTTTGTCACAATGGATCAACTGCCTCACTCTCTGAAATCATTGGAGATATCAAATTGCAAGAACTTGAGATGTTTACTGGATAATGGAACATGCACTTCTTCATCAATAATTATGCATGATGACAATGTACAGCATGGTAGCACAATCATTTCTCATTTGGAGTATGTGTACATTGGCTGGTGTCCATCTCTCACCTGCATATCAAGAAGTGGTGAGTTACCTGAATCTGTCAAACATTTGTTCATTTGGAATTGTTCAGAGCTATCGTGCTTGTCAATGAAAGGCCAATTACCAAAAAGTATTGAGAGACTGGAGATTCAATCCTGTCCAAAGCTTGAGTCAATAGCAAACAGGTTGCACAGAAACACCTCCTTGGAATCTATTCAGATATGGAACTGTGAAAACCTCAAATCCCTCCCTGAAGGATTGCATTTCCTTGTGAATTTAAAGGAGATCAAAATTATTGGTTGCCCAAATTTGGTTTCCTTCCCAGAAGAAGGTTTGCCCGCCTCAAGTCTGTCAGAACTTTCCATCATGAGCTGTGAGAAACTAGTGGCCCTGCCGAACAGCATGTACAATCTCGACTCCCTGAAAGAGCTGGAGATTGGATACTGTCCAAGCATTCAATATTTTCCGGAAATAAACTTTCCAGACAACTTAACATCCCTTTGGATCAATGACCATAATGCCTGTGAAGCAATGTTCAATTGGGGCTTATACAAGCTCTCTTTTCTTAGGGACCTCACCATCATAGGTGGAAATTTGTTTATGCCACTTGAAAAGCTGGGGACAATGCTTCCATCCACTTTAACTAGCCTCACTGTTCAAGGCTTTCCACACTTGGAAAACCTGTCATCAGAGGGCTTTCATAAACTTACCTCTTTATCTAGCCTAACCCTAAGACATCTCTCAAATCTAACATTCCTACCTTTCTCGGGGTTTAAATACCTTACCTCTCTTGAAGAGCTTTCTATTTATAACTGTCCCAAGCTCTTATGTTTACCAGAAAAGGGCCTTCCTTCCTCACTTTTGGAGCTATATATACAAGACTGTCCTTTCCTGAAAGAACAGTGCAGGAAAGATAAAGGGAGAGACTGGTTGAAGATTGCTGACGTTCCTTATGTTGAGATTGATGGCAAATTTATCTATGACTCGGATTATGAGGATTGA 3153 0.3895 MATTFGGILSSQKDARDWENVMDFEIWDLAEEESNILQTLRLSYNQLPSYLKRCFAYCSILPKGFEFEEKEIVLLWMAEGLLEQKSQKQMEDVGHEYFQELLSASLFQKSSSNRSLYVMHDLINDLAQWVAGESCFKLDNNFQSHKQKKKKISKMTRYASYVGGEYDGIQMFQAFKEAKSLRTFLPLKHRRLEEWSYITNHVPFELLPELRCLRALSLSGYFISKLPNSVSNLNLLRYLNLSSTDLRQLPESICSLCNMQTLLLRDCFNLEELPSNMSDLINLRHLDITRSHSLTRMPHGIGKLTHLQTLSNFVVGSSGIGELMKLSNIRGVLSVSRLEHVTDTREASEAMINKKVGIDVLKLKWTSCMNNQSHTERAKEVLQMLQPHKNLAKLTIKCYGGTSFPKWIGDPSYKSLVFLKLKDCAHCTSLPALGNLHALKELYIIGMKEVCCIDGEFCGNACLRPFPSLERLYFMDMEKWENWFLSDNNEQNDMFSSLQQLFIVKCPKLLGKLPENLPSLKHVIVKECEQLLVTISSLPVLYKLEIEGCKGLVLNCANEFNSLNSMSVSRILEFTFLMERLVQAFKTVEELKIVSCALDETVLNDLWVNEVWLEKNPHGLSSILRLIEIRNCNIMKSIPKVLMVNSHFLERLYICHCDSIVFVTMDQLPHSLKSLEISNCKNLRCLLDNGTCTSSSIIMHDDNVQHGSTIISHLEYVYIGWCPSLTCISRSGELPESVKHLFIWNCSELSCLSMKGQLPKSIERLEIQSCPKLESIANRLHRNTSLESIQIWNCENLKSLPEGLHFLVNLKEIKIIGCPNLVSFPEEGLPASSLSELSIMSCEKLVALPNSMYNLDSLKELEIGYCPSIQYFPEINFPDNLTSLWINDHNACEAMFNWGLYKLSFLRDLTIIGGNLFMPLEKLGTMLPSTLTSLTVQGFPHLENLSSEGFHKLTSLSSLTLRHLSNLTFLPFSGFKYLTSLEELSIYNCPKLLCLPEKGLPSSLLELYIQDCPFLKEQCRKDKGRDWLKIADVPYVEIDGKFIYDSDYED* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1894 1050 SUPERFAMILY L domain-like 118 589 - -
Gso15g1894 1050 Gene3D Ribonuclease Inhibitor 778 876 IPR032675 -
Gso15g1894 1050 Gene3D Ribonuclease Inhibitor 877 1023 IPR032675 -
Gso15g1894 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 58 IPR027417 -
Gso15g1894 1050 Gene3D - 38 129 IPR036388 -
Gso15g1894 1050 Gene3D Ribonuclease Inhibitor 170 568 IPR032675 -
Gso15g1894 1050 SUPERFAMILY L domain-like 712 1030 - -
Gso15g1894 1050 PANTHER OS06G0667900 PROTEIN 1 412 - -
Gso15g1894 1050 PANTHER OS06G0667900 PROTEIN 671 877 - -
Gso15g1894 1050 PANTHER OS06G0667900 PROTEIN 833 1001 - -
Gso15g1894 1050 PANTHER OS06G0667900 PROTEIN 420 691 - -
Gso15g1894 1050 PANTHER DISEASE RESISTANCE PROTEIN RP 833 1001 IPR044974 GO:0006952
Gso15g1894 1050 PANTHER DISEASE RESISTANCE PROTEIN RP 420 691 IPR044974 GO:0006952
Gso15g1894 1050 PANTHER DISEASE RESISTANCE PROTEIN RP 671 877 IPR044974 GO:0006952
Gso15g1894 1050 PANTHER DISEASE RESISTANCE PROTEIN RP 1 412 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1894 Gso-Chr15 41595335 41599209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1894 213 310 WRKY Transcription Factor Family AT4G12020 36.364 2.73e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1894 - - gmx:100784811 2095.09