Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1877 ATGGCCTCGCTTGAATTTATAGCCAGCATAGGCCTTCTTTTTTTCCTCTTCCTTGTGGGTCAGGAGCTTGATCTCTACTCCATTCCCCAGAGCGGTCGAAAAGCATTTTGCATCACCGCCGTCGAGATCTCTCTTCCTTTCATATGCGGCATTGACGTCGCCGTCATCCTTTGCAAAATCGTGGATGGCGTCGACAAAGCCGGATTCCCGCAGTTCCTCATCTTCATGGGAGTCTCCCTTTCCATCACCGCATTCCCTGTGCTCGCGCGAATCCTAGTGAAGCTCAAGCTCCTCACCATGCGCGTGGGAGAGACCACCATTGTCGCGACGGCGTTCAATGACGTTGCCGCGTGGATCCTACTTGCCCTTGCCGTAGTCCTCACGGGAGACGGCGGAGGACACAAAAGCCCCCTCGTGTTCGTCTAG 426 0.5493 MASLEFIASIGLLFFLFLVGQELDLYSIPQSGRKAFCITAVEISLPFICGIDVAVILCKIVDGVDKAGFPQFLIFMGVSLSITAFPVLARILVKLKLLTMRVGETTIVATAFNDVAAWILLALAVVLTGDGGGHKSPLVFV* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1877 141 PANTHER CATION/H + ANTIPORTER 3 137 - -
Gso15g1877 141 Pfam Sodium/hydrogen exchanger family 3 134 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso15g1877 141 Gene3D - 1 141 IPR038770 -
Gso15g1877 141 PANTHER K(+)/H(+) ANTIPORTER 1 3 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1877 Gso-Chr15 40789230 40790655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1877 4 139 Antiporter Super Family AT4G23700 54.745 1.39e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1877 - - gmx:112997645 247.669