Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1874 ATGGGGACCCAAAGGCAAAACTCAATGTACAGTCTCACACTGGATGAGGTTCAGAATCAATTGGGTGATTTGGGGAAGCCGCTAACTAGTATGAACCTTGATGAGCTTCTAAAAAATGTGTGGACTGCTGAGGCAAGCCAGACCATTGGTATGGACAATGAGGGCACATCACAAGCTAGTCAAGCTGCTCTGCAGCATCAGGCTAGTCTGTCATTAACTGGAGCACTAAGCAAGATGACTGTAGATGAGGTTTGGAGAGATATCCAAGAAAACAAAATCATTGCGGAGAAGAAGTTCGAAGACAGACATCCTACTTTGGGAGAAATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTTGTTGCAGATGCATCTTCTAATAGAACAAATACTGGTACTATAGCTGGAGTTGATTCAAACGTGGCAGTACCGCAGTTTCCTTCACAAGGACAGTGGATACAATATCCACAAGTACAATATCAGCATTCCCCACAAAGTTTAATGGGGGGGATCTATATGCCTAGCCAAGGTATGGTACAACCAATACACATGGGAGCTGAAGCTTCGATAGATGTTTCATTTGCAGATAGTCAGGTGGCATTGCCATCACCTCTGATGGGAACAATGCCTGATATGCTGACTCCTGGAAGAAAATGGAGCAATTCTGAGGACATGAGAGAGAAGACTGTTGAGAGGAGACAGAAAAGGATGATAAAAAATCGGGAATCAGCTGCCCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAATTGGAGAATAAAGTCTCGCGCCTGGAAGAGGAAAATGAAAGGCTGAGGAAACAAAAGGAGCTAGAGCTGATGTTGCCATGTGAACCCCCTCCTGAACCTAAATATCAACTTCGCCGAATAGCATCAGCTCCATTCTGA 909 0.4444 MGTQRQNSMYSLTLDEVQNQLGDLGKPLTSMNLDELLKNVWTAEASQTIGMDNEGTSQASQAALQHQASLSLTGALSKMTVDEVWRDIQENKIIAEKKFEDRHPTLGEMTLEDFLVKAGVVADASSNRTNTGTIAGVDSNVAVPQFPSQGQWIQYPQVQYQHSPQSLMGGIYMPSQGMVQPIHMGAEASIDVSFADSQVALPSPLMGTMPDMLTPGRKWSNSEDMREKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELELMLPCEPPPEPKYQLRRIASAPF* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1874 302 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 300 IPR043452 GO:0003700|GO:0045893
Gso15g1874 302 MobiDBLite consensus disorder prediction 282 302 - -
Gso15g1874 302 CDD bZIP_plant_BZIP46 232 286 - -
Gso15g1874 302 MobiDBLite consensus disorder prediction 205 227 - -
Gso15g1874 302 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 235 250 IPR004827 GO:0003700|GO:0006355
Gso15g1874 302 SMART brlzneu 228 296 IPR004827 GO:0003700|GO:0006355
Gso15g1874 302 Coils Coil 248 282 - -
Gso15g1874 302 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 230 275 IPR004827 GO:0003700|GO:0006355
Gso15g1874 302 SUPERFAMILY Leucine zipper domain 232 277 IPR046347 GO:0003700|GO:0006355
Gso15g1874 302 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 4 300 - -
Gso15g1874 302 Pfam bZIP transcription factor 232 275 IPR004827 GO:0003700|GO:0006355
Gso15g1874 302 Gene3D - 230 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1874 Gso-Chr15 40614676 40620002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1874 5 302 bZIP Transcription Factor Family AT3G56850 53.974 2.40e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso15g1874 bZIP_1 1.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1874 K14432 - gmx:100305348 576.63