Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1870 ATGACGCCGCTGAAGGCGCTGTCCAATCAGAAATTTGGCGACGAGACTTTTGGAAGCAGTAATGTTGGCCTTCTCACGGGTGATTCTGCAGTGAACAAGGATGCTCAGTTACTCACACTGTTCAAAGAAGCCACGCTGCAAGGGATGAACAACCATGTCTTTGTTGCTTATACTTCTGTTGTTGCTACCACTCTACTCTTTCCTATCAGTTTTTTCAGTAGAAAATCAAGAGTGGTTCCTACACTTAGTTTCTCCATAGCATCCAAAATGATTCTCATTGGGATGATTGGAACCTCATGTCACATAATGTATTATGTTGGAGTTAGCTACAGTTCTCCAACACTTGCTTCATCAATCGCCAATCTGGGCCCTGCTTTCACCTTCATTCTTGCCATTATTTTCAGGATGGAAAAGATAGCTGCCAAAAGCAGAAGTAGTCAAGCTAAGGTAATTGGAAGCATAATATCAATAGCAAGAGCATTTGTATTGACTTTGTACAAAAGCCCTTCAATCATCAAAGCTCATTCCCATGATCTTTCCTTACCACTTCAACAACCATTTAGCTTTCTTAAATCTAGGGATGCAGATTGGGTCATTGCTGGCACATGCTTGGAAAGTAGGACTGAATATTTCATTAATCTCCATTGTTTGCACTGTAAGATACCTTTCTAA 672 0.4077 MTPLKALSNQKFGDETFGSSNVGLLTGDSAVNKDAQLLTLFKEATLQGMNNHVFVAYTSVVATTLLFPISFFSRKSRVVPTLSFSIASKMILIGMIGTSCHIMYYVGVSYSSPTLASSIANLGPAFTFILAIIFRMEKIAAKSRSSQAKVIGSIISIARAFVLTLYKSPSIIKAHSHDLSLPLQQPFSFLKSRDADWVIAGTCLESRTEYFINLHCLHCKIPF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1870 223 PANTHER WAT1-RELATED PROTEIN 32 219 IPR030184 GO:0016021|GO:0022857
Gso15g1870 223 Gene3D - 1 60 IPR027417 -
Gso15g1870 223 PANTHER WAT1-RELATED PROTEIN 32 219 - -
Gso15g1870 223 Pfam EamA-like transporter family 40 143 IPR000620 GO:0016020|GO:0016021
Gso15g1870 223 SUPERFAMILY Multidrug resistance efflux transporter EmrE 58 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1870 Gso-Chr15 40378644 40380590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1870 34 211 Nodulin-like Gene Family AT3G28050 45.506 2.72e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1870 - - gmx:112999615 429.483