Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1869 ATGGTGACCACGTTATTTATTTGGTTCTTCTTGTTCTCCCACATGACTAGAGCTTCCACTTCAGTAGACAGTTTAGCAGTGGATGAATCTATCCGAGATGGTGAGACTTTGGTTTCAGCAGGTGGAATTATTGAAGCGGGTTTCTTCAGTCCCGAAAAGTCAACAAGACGATACTTGGGTCTTTGGTACAGAAATGTGTCCCCTTTAACAGTGGTGTGGGTGGCTAACCGAAACACACCTCTTGAAAACAAATCAGGAGTTCTAAAACTCAATGAAAAAGGGATTCTTGTGCTTCTCAATGCTACAAACACCACCATTTGGTCATCATCCAACAACACAGTATCAAGCAAAGCAAGGAACAATCCAATTGCTCAGCTCTTGGATTCAGGAAATTTCGTGGTAAAAAATGGACAAAGTAACAAGGATGACAGTGGCGATGTCTTGTGGCAGAGTTTTGATTATCCGGGTGATACGTTGTTGCCAGGAATGAAAATTGGATGGAGCTTGGAGACTGGTCTAGAAAGGTTTCTAACATCTTGGAAAAGTGTTGATGATCCTGCTGAGGGAGAATATGTTGTAAAAATGGATGTTAGAGGGTATCCTCAGTTAATGAAGCTAAAGGGAACTGATATAAGGTTCAGAGCTGGGTCATGGAATGGCTTGTCTCTTGTTGGATATCCTGCTACAGCTTCTGATATGTCGCCAGAAATTGTGTTCAATGAAAAAGAGGTGTATTATGACTTCAAGATTCTTGATAGTTCAGCCTTTATCATAGATTCACTTACCCCTTCAGGCAATTTGCAGACCTTGTTTTGGACAACTCAAACAAGGATTCCAAAAATCATCTCGACCGGGGAACAAGATCAATGCGAGAATTATGCCTCTTGTGGTGTAAATTCTATATGCAACTATGTTGATAACCGTCCAACTTGTGAATGCCTGAGGGGATATGTTCCCAAGTCCCCTAATCAATGGAATATAGGAATTCGGTTGGACGGTTGTGTTCCAAGGAATAAATCAGATTGCAAAAGCAGTTATACAGATGGCTTCTGGAGGTACACATACATGAAGTTGCCTGACACGTCTTCATCGTGGTTTAACAAGACCATGAACCTTGATGAATGTCGCAAGTTATGTCTTCAAAACTGTTCTTGTACAGCATATGCCAATTTAGACATCCGTGATGGAGGAAGTGGTTGTCTACTTTGGTTTAGTACTCTAGTTGACTTGAGGAAATTCTCTCAATGGGGACAAGACTTGTTTATTAGAGTCCCTTCTTCAGAATTAGATCATGGCCACGGAAACACCAAGAAAAAGATAGTGGGAATCACTGTTGGTGTGACTATTTTTGGATTAATCATCTTATGTCCTTGCATATATATAATTAAAAATCCAGGAGCTGCAAGAAAATTTTACAACAGAAATTACCAACATATACTGAAGAAGGAGGACATTGATTTGCCAACTTTCGATTTGTCCGTCTTGGTTAATGCCACTGAAAACTTTTCAACTGGAAACAAGCTTGGAGAAGGTGGATTTGGACCCGTATACAAGGGTACACTGATGGATGGGAAAGTGATAGCTGTGAAAAGGCTCTCAAAGAAATCAGGACAAGGGGTGGATGAATTCAAAAATGAAGTGGCGTTGATTGCGAAACTTCAACACCGTAATCTTGTAAAGCTTTTTGGTTGCTGCATTGAAGGAGAAGAAATAATGTTGATTTATGAATACATGCCCAACCAAAGCTTGGACTACTTTGTTTTTGATGAAACGAAAAGGAAGTTCTTGGAGTGGCATAAGCGTTTCAAAATTATTAGTGGCATTGCTCGAGGACTTCTGTATCTTCATCAAGACTCTAGGCTGAGGATTGTTCACAGAGATCTAAAACCTAGCAATATTTTACTAGATGACAATTTGGATCCGAAAATATCAGACTTTGGCTTGGCTCGACCATTTTTGGGAGATCAAGTTGAGGCAAACACAGATAGGGTGGCTGGAACTTATGGTTACATGCCTCCTGAATATGCTGCCCGTGGGCATTTTTCCGTGAAATCCGATGTCTTCAGTTATGGTGTGATAGTATTAGAGATTGTAACTGGGAAGAAAAACTGGGAATTTTCAGACCCAAAACACTACAATAATCTTCTAGGACATGCGTGGAAATTATGGACTGAAGAGAGGGTGCTAGAACTACTGGATGAATTGTTAGAAGAACAATGTGAACCCTTTGAAGTCATACGATGCATACAGGTGGGCCTATTATGTGTGCAACAAAGACCACAAGATAGGCCAGACATGTCATCAGTTGTTTTAATGTTGAATGGTGATAAATTGTTGCCAAAGCCAAAGGTTCCTGGCTTTTACACTGAAACAGATAATAAATCTGAAGCAAATTCTTCATTGGAAAATTATAAATTGTACTCAGTTAATGATATTTCCATCACAATGTTAGATGCAAGATAG 2463 0.3991 MVTTLFIWFFLFSHMTRASTSVDSLAVDESIRDGETLVSAGGIIEAGFFSPEKSTRRYLGLWYRNVSPLTVVWVANRNTPLENKSGVLKLNEKGILVLLNATNTTIWSSSNNTVSSKARNNPIAQLLDSGNFVVKNGQSNKDDSGDVLWQSFDYPGDTLLPGMKIGWSLETGLERFLTSWKSVDDPAEGEYVVKMDVRGYPQLMKLKGTDIRFRAGSWNGLSLVGYPATASDMSPEIVFNEKEVYYDFKILDSSAFIIDSLTPSGNLQTLFWTTQTRIPKIISTGEQDQCENYASCGVNSICNYVDNRPTCECLRGYVPKSPNQWNIGIRLDGCVPRNKSDCKSSYTDGFWRYTYMKLPDTSSSWFNKTMNLDECRKLCLQNCSCTAYANLDIRDGGSGCLLWFSTLVDLRKFSQWGQDLFIRVPSSELDHGHGNTKKKIVGITVGVTIFGLIILCPCIYIIKNPGAARKFYNRNYQHILKKEDIDLPTFDLSVLVNATENFSTGNKLGEGGFGPVYKGTLMDGKVIAVKRLSKKSGQGVDEFKNEVALIAKLQHRNLVKLFGCCIEGEEIMLIYEYMPNQSLDYFVFDETKRKFLEWHKRFKIISGIARGLLYLHQDSRLRIVHRDLKPSNILLDDNLDPKISDFGLARPFLGDQVEANTDRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIVTGKKNWEFSDPKHYNNLLGHAWKLWTEERVLELLDELLEEQCEPFEVIRCIQVGLLCVQQRPQDRPDMSSVVLMLNGDKLLPKPKVPGFYTETDNKSEANSSLENYKLYSVNDISITMLDAR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1869 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Gso15g1869 820 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1869 820 SMART ntp_6 345 424 IPR003609 -
Gso15g1869 820 Gene3D - 17 152 IPR036426 -
Gso15g1869 820 Pfam Protein kinase domain 503 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1869 820 SMART blect_4 28 155 IPR001480 -
Gso15g1869 820 CDD PAN_AP_plant 339 425 - -
Gso15g1869 820 SMART serkin_6 502 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1869 820 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Gso15g1869 820 Gene3D Hepatocyte Growth Factor 342 420 - -
Gso15g1869 820 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Gso15g1869 820 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 17 818 - -
Gso15g1869 820 Pfam Domain of unknown function (DUF3403) 779 820 IPR021820 GO:0004674
Gso15g1869 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Gso15g1869 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 186 IPR036426 -
Gso15g1869 820 SUPERFAMILY Protein kinase-like (PK-like) 485 785 IPR011009 -
Gso15g1869 820 ProSiteProfiles Bulb-type lectin domain profile. 22 147 IPR001480 -
Gso15g1869 820 CDD STKc_IRAK 508 775 - -
Gso15g1869 820 Pfam PAN-like domain 342 410 IPR003609 -
Gso15g1869 820 ProSiteProfiles EGF-like domain profile. 286 323 IPR000742 -
Gso15g1869 820 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Gso15g1869 820 CDD B_lectin 28 155 IPR001480 -
Gso15g1869 820 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 818 - -
Gso15g1869 820 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544
Gso15g1869 820 Pfam D-mannose binding lectin 70 181 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1869 Gso-Chr15 40373044 40376712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1869 422 820 Receptor kinase-like Gene Family AT4G05200 48.325 1.75e-119 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g1869 Pkinase 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1869 - - gmx:100814745 1653.65