Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1850 ATGTATGCACAGTCAAGCACTGCATCACCTCTTCCCTCACCTTCTTCATTCTTCCCCGAAGTCACTGAATTCGAGACCCTCTCCCAACTCAACAATTCTGAGACCAGTTACTACTACAATAGTAATTGTAGCAGTGGCTATAGCAGTTACGGTGGATCACCCTCACCTACACCTACTTCTGTGCCCAGTCCCAACTTGATGCAGAGGAGTGTTAGCTCCCATTCCTTCCACTGCAACAACAATGGCACCCATCATCCCTTTTCTGCTCTCTTTGCTGAGCTGCTCGACTCCGATGTCGATGCTCCCGTTAGGAGAGTTTGCAGTACTGGTGATCTCCAGAAGATTAATGGAATGCAACATAATCATCACTCGGATAGTCCGTTATCGAGCGAAAGTAGTATGATCATAGAAGGAATGAGCAGAGCCTGTCGATATAGCCCAGAGGAGAAGAAAGTCAGAATTGAGAGATACAGAAGCAAGAGGAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGACAGCAGGCCACGCATCAGAGGACGGTTTGCGAGGAACGACGAAATTGACAAGAATACTACACTTCAGTGGAGCCAAATTGGTGCTGGAGAGGAAGAGGATGAAGAAGATGAGAATTGGGTCACTATGTTAGATTCCTTAGTTGCTGCAAATTTTGCACAAGAGTCTCACGGCACCTCCACCTTTGGTCTATTCTATTAG 738 0.4621 MYAQSSTASPLPSPSSFFPEVTEFETLSQLNNSETSYYYNSNCSSGYSSYGGSPSPTPTSVPSPNLMQRSVSSHSFHCNNNGTHHPFSALFAELLDSDVDAPVRRVCSTGDLQKINGMQHNHHSDSPLSSESSMIIEGMSRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNTTLQWSQIGAGEEEDEEDENWVTMLDSLVAANFAQESHGTSTFGLFY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1850 245 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 3 245 IPR045281 GO:0009909
Gso15g1850 245 PANTHER CCT MOTIF PROTEIN 3 245 - -
Gso15g1850 245 ProSiteProfiles CCT domain profile. 150 192 IPR010402 GO:0005515
Gso15g1850 245 MobiDBLite consensus disorder prediction 49 68 - -
Gso15g1850 245 Pfam CCT motif 152 192 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1850 Gso-Chr15 39306395 39308887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1850 146 206 C2C2-CO-like Transcription Factor Family AT5G15850 42.623 3.50e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso15g1850 CCT 8.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1850 - - gmx:102661609 398.282