Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1833 ATGTTGATACTAGTGCTTGGACTAGCTTCAGCTACTTTTTTAGTTTTTGTTGCAGTTTATGTGTTCTATTGCAAGAGAAGGGTGTCAAAGTATGATGAGAGTAAAGACATTGAGAGTTCAGAACACAAGGAGGAGGATGTGGCACAGAAGGAGGATTTGATGATCTTTCAAGGTGGAGAGGACCTTACAATATGTGACATTTTGGATGCTCCTGGTGAAGTGATTGGAAAATCCAACTATGGAACACTGTACAAGGCTTTGTTGCAGAGGAGCAACAAGGTGAGGCTGCTTAGGTTTCTGAGGCCAGTGTGCACTGCAAGGGGTGAGGAATTGGATGAGATGATTCAATTTCTTGGAAGGATAAGGCACCCTAACTTGGTTCCTCTTCTCGGGTTCTACACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTCTATAGGCATGGGAGTCTCACTCAATACATAAGAGATGGAAATGGAGAGTGCTACAAATGGTCTAACATATGTAGAATATCCATTGGTATAGCCAAAGGATTAGAGCATCTTCACACATCACAGGAGAAGCCTATTATCCATGGAAACCTCAAGTCTAAAAACATCCTTTTGGACCGCTCCTACCAGCCATACATCTCGGATTCCGGGCTACATCTTCTGCTGAATCCTACTGCTGGCCAAGAAATGCTTGAAAATTCAGCAGCTCAGGGTTACAAGGCACCTGAGCTCATCAAAATGAAGGATGCTAGTGAAGTGACTGATATATATAGCCTCGGTGTGATCTTGCTGGAATTGCTTTCAGGAAAGGAACCTATCAACGAGCATCCGACTCCTGATGAGGATTTCTATCTGCCAAATTTCATGAGAAATGCAGTCCTTGGACACAGAATTGCTGATTTATACCAACCTGCCTTTCTTCTCAGGAACAGCAGAGATGATAACATTCCAGTGACGGAAGAATGCATTCTCAAAGTCTTTCAACTTGCTATGGCTTGTTGCTCCCCTTCACCCTCAGTTAGACCTAACATAAAGCAAGTCCTCAAGAAACTTGAAGAAATTATGTTCTAG 1065 0.4329 MLILVLGLASATFLVFVAVYVFYCKRRVSKYDESKDIESSEHKEEDVAQKEDLMIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTARGEELDEMIQFLGRIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGSLTQYIRDGNGECYKWSNICRISIGIAKGLEHLHTSQEKPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLENSAAQGYKAPELIKMKDASEVTDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYQPAFLLRNSRDDNIPVTEECILKVFQLAMACCSPSPSVRPNIKQVLKKLEEIMF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1833 354 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 3 352 - -
Gso15g1833 354 Gene3D Transferase(Phosphotransferase) domain 1 148 353 - -
Gso15g1833 354 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 352 - -
Gso15g1833 354 Pfam Protein tyrosine and serine/threonine kinase 73 349 IPR001245 GO:0004672|GO:0006468
Gso15g1833 354 SUPERFAMILY Protein kinase-like (PK-like) 72 352 IPR011009 -
Gso15g1833 354 Gene3D Phosphorylase Kinase; domain 1 60 146 - -
Gso15g1833 354 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1833 Gso-Chr15 38062244 38065608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1833 24 352 Carbohydrate Esterase AT5G61570 58.876 1.56e-137 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso15g1833 PK_Tyr_Ser-Thr 2.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1833 - - gmx:100802295 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1833 15 38062244 38065608 Gso8g1919 8 19024785 19028076 GST