Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1827 ATGAAGTACCTGTTGGTGACGGGTGGAGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCAAGCAGTATTGGAGTACTCCTTCAGGCTTGTGGCTTTCGGGTTACTTCTATCAAGATTGATCCCTATCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGGGAAGTGTTTGTTTTAGATGATGGCGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACCTCAAATTAACTCGTGACAATAATATCACAACTGGGAAAATATATCAGTCTGTAATTGAAAAGGAGAGAAGAGGAGATTATCTTGGCAAGACTGTGCAGGTTGTTCCACACATTACTGATGCCATCCAAGAATGGATAGAGCGTGTGGCACAGATACCAGTTGATGGAAAAGAAGGCCCAGCTGATGTTTGTGTTATTGAGTTGGGTGGAACTATTGGAGATATCGAGTCTATGCCTTTTATTGAAGCACTTGGCCAGTTTTCATACCGTGTTGGCCCTGGTAACTTCTGTTTAGTTCATGTCAGCTTGGTGCCTGTTATCAATGTTGTTGGTGAGCAGAAAACAAAGCCAACCCAACACAGTGTCCGCCAACTTAGAGGGTTAGGGTTGACCCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGACAACATTAAGGAAAAACTTTCTCAATTTTGTCATGTTCCGTCATCAAGCATACTAACTCTCTATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAGTGACCAAAAGGCGCATGATGCAATCCTGAAAACATTAAACCTGCGAGGTGTTGCTACAGAGCCTAATTTTAAGGAGTGGATTACAACAACAAAAGTATATGACAAATTTCATGAAATGGTTAGAATTGCAATGGTGGGAAAATATACTAACCTCTCAGATGCATATCTTTCTGTACTGAAGGCACTTTTGCATGCTTCTGTTGCTTGCAATCATGAGCTTGTTGTGGATTTGGTTCCCGCTGAACATCTCGAAGATGATACCTCTAAAGAGGATCCTGATGCATATAAAGCTGCTTGGGGTCTTTTGAAGGGAGCTAATGGGATTCTAGTTCCAGGAGGTTTTGGTGACAGAGGAGTGGAAGGAAAAATTCTTGCTGCCAAGTATGCTCGAGAAAATAGCATTCCATATCTGGGCATTTGCTTGGGGATGCAAATAGGTGTAATTGAGTTTTCAAGATCTGTTCTGGGTCTTCATGATGCTAATAGCACAGAATTTGATCCCAAAACCAAAAACCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGGGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTTCATGTTGCTGACTGCAAATCAGCCAAGTTGTATGGTAATGCAAGCTTTGTTGATGAGCGACATCGGCATAGATACGAGGTTAATCCTGATATGATATCACAACTCGAGAGTGCTGGTCTATCTTTTGTTGGCAAAGACGAAACTGGGAAGCGCATGGAGATAGTTGAATTTCCTGGTCATCCTTTCTTCATTGGTGCTCAGTTTCATCCTGAGTTCAAGTCCAGACCAGGGAAACCTTCTCCATTATTCTTAGGATTAATATCAGCAGCATGTGAGAGGACAGTTGTGCCTGCAAGCAAAGGTTATGGCAAGTTAACAAATGGGATACACTCACCAATGTTGAAAGCAGCAGCAGCACATAATGGAAATAATGGGTTCAAATCTTCCAATAGTTCCTTAAATGGTGTATATACAAGTACAACTACCAATGGGGTGTGTGTTGATGGGAGGAGCTGTTAA 1827 0.4204 MKYLLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDLKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAQIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPVINVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNIKEKLSQFCHVPSSSILTLYDVPNIWHIPLLLSDQKAHDAILKTLNLRGVATEPNFKEWITTTKVYDKFHEMVRIAMVGKYTNLSDAYLSVLKALLHASVACNHELVVDLVPAEHLEDDTSKEDPDAYKAAWGLLKGANGILVPGGFGDRGVEGKILAAKYARENSIPYLGICLGMQIGVIEFSRSVLGLHDANSTEFDPKTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFHVADCKSAKLYGNASFVDERHRHRYEVNPDMISQLESAGLSFVGKDETGKRMEIVEFPGHPFFIGAQFHPEFKSRPGKPSPLFLGLISAACERTVVPASKGYGKLTNGIHSPMLKAAAAHNGNNGFKSSNSSLNGVYTSTTTNGVCVDGRSC* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1827 608 SUPERFAMILY Class I glutamine amidotransferase-like 298 549 IPR029062 -
Gso15g1827 608 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Gso15g1827 608 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Gso15g1827 608 Gene3D - 1 292 IPR027417 -
Gso15g1827 608 Gene3D - 295 556 IPR029062 -
Gso15g1827 608 PANTHER CTP SYNTHASE 1 573 - -
Gso15g1827 608 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Gso15g1827 608 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Gso15g1827 608 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Gso15g1827 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Gso15g1827 608 PANTHER CTP SYNTHASE 1 573 IPR004468 GO:0003883|GO:0006221
Gso15g1827 608 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Gso15g1827 608 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Gso15g1827 608 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1827 Gso-Chr15 37201225 37209219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1827 K01937 - gmx:100799980 1206.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1827 15 37201225 37209219 Gso8g1933 8 19281260 19288735 GST
Gso8g1261 8 11669594 11676942 Gso15g1827 15 37201225 37209219 PCT
Gso15g1827 15 37201225 37209219 Gso8g1334 8 12554834 12561628 PCT
Gso15g1827 15 37201225 37209219 Gso15g2192 15 50430996 50437663 PCT