Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1820 ATGGTACTTAAGATACAGACCAGCTTAATTTGGGTTCTGTTTGATGCTGTTTTGATTGTTATAGCACGTTCTCCAGACAAGATAAAGAGCATTGATGGCTCAAAAGAAACTCTTAAACTCAGTGTGAGGATCAGTGATCTATGGTTTATTGGCACGCCTAACAAATATGAGCAAGCTGAAATGGTGTTTGTGGACTCCGATGGTGATGAGATCCACGCTTACAGAGTGTGTGATCATCAATTTAAATTGGTGTTTATTGGGGTTACTGTTGTGAGGGAGTGTGTTCTAGGGGACATCCCTTTTAGAAAATACAGGTTTGCTGGATTTGCAGATGTTGTGGCTGGCCAGTTTGAACGTGGACTATTGGTTGATGTTATTGGTGTTGTGGAGGAGGTTGCCTTTCGGCAAGTTTCAGGAAAAGGTAGAAGGGTAGTCTTCAAATTAAAGGACTTGAGCCAGCAATTGCTATCTTGCACTTTGTGGGATGATTATTGCTTACAGTTTTTGAAGTTCTTAGATGATTATAAAGGTGATGGCCCAGTTACAGTTCTATTAAGCCATTGTAGGATCAAGGAAGCGCAAGGATCTTATCCTGCATCGATCAACAATTCTTTCAAGGCTTCAAAGTTAATTATTAACCAGCCCGTGATGGAGATTCAAGAATTCAATGAACGGCTTGTAGAGTTGGGCATTGAGGCCTGGTCAGGTTTTAAATCCCATGGTGAAGGGAGTACACAGCTTTCAGGTTCTATCCAATTATCATCAAAAGAATCATTCTTTGGCAAGGCTGAGGCAAAGACTATTGCTGAGATTAACACCATCTCTGAAGAAATTGTTTGTGTCACTGTTGGCACAATTACTAGGATTGTTCTTGACAATCATTCATGGTGTTATACAGCTTGCATTCAGTGCCATAAAAAAAGTGATACAAAGATGGCGCCCTTTACATGTGCATGCGACAAATACAATAAGGAAGTTGTGCTTAGGTGA 990 0.4051 MVLKIQTSLIWVLFDAVLIVIARSPDKIKSIDGSKETLKLSVRISDLWFIGTPNKYEQAEMVFVDSDGDEIHAYRVCDHQFKLVFIGVTVVRECVLGDIPFRKYRFAGFADVVAGQFERGLLVDVIGVVEEVAFRQVSGKGRRVVFKLKDLSQQLLSCTLWDDYCLQFLKFLDDYKGDGPVTVLLSHCRIKEAQGSYPASINNSFKASKLIINQPVMEIQEFNERLVELGIEAWSGFKSHGEGSTQLSGSIQLSSKESFFGKAEAKTIAEINTISEEIVCVTVGTITRIVLDNHSWCYTACIQCHKKSDTKMAPFTCACDKYNKEVVLR* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1820 329 Gene3D - 249 329 IPR012340 -
Gso15g1820 329 PANTHER REPLICATION FACTOR A 1, RFA1 31 328 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso15g1820 329 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 31 328 - -
Gso15g1820 329 CDD RPA1_DBD_B_like 124 226 - -
Gso15g1820 329 SUPERFAMILY Nucleic acid-binding proteins 104 225 IPR012340 -
Gso15g1820 329 Gene3D - 97 232 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1820 Gso-Chr15 36534852 36537119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1820 79 326 Core DNA Replication Machinery Family AT4G19130 26.119 7.18e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1820 - - gsj:114386105 660.988