Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1808 ATGGCATCAAAACCAGTTTCCCTTTCACATTTACTCCTTTTAACCTTGTTTCTTGCCACCATCCAACTCTCAGAGCAGTTAGAGTTTTCTCAGTCTCAAACACTACTCAAGGTTCAGCAACTTCTTGGCTATCCATCAGCACTAGGTACTCTCAGCAGCACCACAGACTTTTGCAACATTGAACCTACCTCATATTTGACACTAGTCTGCTATGAGGATAGCTTGACACAGCTGCATGTTGTTGGCAACAATGAGTATAATCCACTGCCTCAAAACTTCTCCTCAGATACTCTATTTGCTACACTAGGCACTCTTTCAAGCTTGAAAGTCATTTCCTTAGTTTCTCTTGGACTCTGGGGGAACTTACCTGAAAGCATTGCTCAAATGTCTTCATTGGAAATACTTAACATTACCTCAAACCACTTCAGTGGAGCCATCCCTTCTCAGCTTTCACTTCTGAGGAACCTTCAGTCAGTGGTGCTTGATGATAACAACTTCAATGGTGAGGTTTCCAACTGGGTAGGCTCACTTCAAGGTTTGGCTATGCTTAGTATGAGGAACAACTGGCTTAGTGGGAGCCTGCCAACTTCATTGAATGCTCTTCATACCTTGAGGGTGTTAGATCTATCAAATAATCAGTTATCTGGGGAACTTCCTCATCTTAAGAATTTGCCAAACCTTCAAGTTCTTAACTTGGAAAACAACACATTTGGACCTCATTTTCCTTCTCTCCCCACCAAGTTGGTTTCCCTTGTGCTTAGAAATAATAGCTTCAGGTTAAGTGTCCCTTCTAATTTAAGTTCATTCTATCTGCTCCAAAGGCTAGACCTTTCATTGAATGGTTTTGTGGGGCCATTTCCACCATCCTTATTGTCTCTGCCTTCCATCAATTACCTTGATATTTCCTCAAATAAATTCACTGGCATGCTTCTCAATAACTTGTCATGCAATGATGATCTCCACTTTGTAAATTTGTCTTCAAATCTTCTGAAAGGGGAACTTCCCACTTGTTTAGAACCAAAGACCAGGGTTGTTCTGTATGCTAGAAACTGCTTATCAAACAAGAACCAAGATCAGCACCCTTCAGATTTCTGCAGCAATGAGGCTTTGGCAGTGACGATCATAACCCATCAACAGAAGCACAAGAGAACAACTAGTAAAGCAATTATTGTATCTAGTATGGGAGGTCTTGTTGGTGGAGTGTTGATTGTAGGAGTGGTCATCTTGGTTGTTAGCCGAGTTCATAAGAAACAAGTAGTGAAAATACCTTCAAAGTCTACTTTGGAGCATGCTATCAGTCAGGAACATAATGAAGATGAAGTGAAAACTACTACAAGGTCCATAATGGAGCATATCATCAAAAGGGTTCCTGACAAACGTGCTGTGGAAACACTAACAAGATCCATAAAGGAGCATGTCATGAGCCGGGTGAATAGCAAGCGTGTTGTGAGGGCATCAACAAGGTCCATAATAGAACATGTATCATCAGCAAACACAGCAAAACTTCTCAATGATGCAAGGTATATATCAGAAACAATGAAGATGGGAGCCAGCCTTCCTGCTTATAGGACCTTTGCTTTGGAGGAACTTAAGGAAGCTACAAACAATTTTGATGAATCATCTTTCATAAGTGAAGGCCCACGTGGTCAGATTTATAAAGGGGTGCTTTCTGATGGAATGCAAATTGCTATTAGAGGTTTGAAAATGAGAAAGAAACATGGCCCTCAGACTTACATGCACCATGTTGAGATGATTTCAAAACTAAGGCATTCACACTTGGTTAGTGCACTTGGGCATGCTTTTGAGAGCAACCAAGATGATTCAAGTGTAAACAATGTATTTCTCATATTTGAGTTTGTTCCAAATAAAAGTTTAAGAAGCTGTGTTTCGGGATCTTCTGGGGAAAAGCTTTCTTGGACTCAGAGAATAACAGCTGCAATTGGAGTGGTGAAAGGCATTCAATTTTTGCACACAGGGATAGTGCCTGGACTGTATTCAAATAATCTGAAGATAACAGATATTCTTTTGGATAACAATCACAATGTTAAAATAAGCAGTTATAATCTGCCACTCTCTGCTGAAAATAAAAGAATGATCAGCAATGGAACTTCCCCTGGCTTTAAAGGAAATGTCCAAGCAAGGATCAAGGATGAAGACAAGAATGATGTCTATGACATTGGGGTAATCTTGCTAGAAATCATTCTGGGACGACCAATAATGTTCCACAATGAAGTTGGAACACTAAAAGATCTTTTACAGGTAAGCATCAAAACTGATGACATAGCTAGAAGGAGTATTGTTGACCCAGCAGTTCACAAGGAATGTTCAGATGAATCATTAATGACAATGATGGAGATATGTGTAAGGTGTCTCTCTGGTGACCCAACTGAAAGGCCTTCTGTGGAAGATATTCTCTGGAATTTGCAGTTTGCAGCACAAGTTCAGAATTCATGGAGAAGAGACTCAAGTGATCACAGTTACTCACCTGCACCATCCTCCAGGGAAACATAA 2511 0.4038 MASKPVSLSHLLLLTLFLATIQLSEQLEFSQSQTLLKVQQLLGYPSALGTLSSTTDFCNIEPTSYLTLVCYEDSLTQLHVVGNNEYNPLPQNFSSDTLFATLGTLSSLKVISLVSLGLWGNLPESIAQMSSLEILNITSNHFSGAIPSQLSLLRNLQSVVLDDNNFNGEVSNWVGSLQGLAMLSMRNNWLSGSLPTSLNALHTLRVLDLSNNQLSGELPHLKNLPNLQVLNLENNTFGPHFPSLPTKLVSLVLRNNSFRLSVPSNLSSFYLLQRLDLSLNGFVGPFPPSLLSLPSINYLDISSNKFTGMLLNNLSCNDDLHFVNLSSNLLKGELPTCLEPKTRVVLYARNCLSNKNQDQHPSDFCSNEALAVTIITHQQKHKRTTSKAIIVSSMGGLVGGVLIVGVVILVVSRVHKKQVVKIPSKSTLEHAISQEHNEDEVKTTTRSIMEHIIKRVPDKRAVETLTRSIKEHVMSRVNSKRVVRASTRSIIEHVSSANTAKLLNDARYISETMKMGASLPAYRTFALEELKEATNNFDESSFISEGPRGQIYKGVLSDGMQIAIRGLKMRKKHGPQTYMHHVEMISKLRHSHLVSALGHAFESNQDDSSVNNVFLIFEFVPNKSLRSCVSGSSGEKLSWTQRITAAIGVVKGIQFLHTGIVPGLYSNNLKITDILLDNNHNVKISSYNLPLSAENKRMISNGTSPGFKGNVQARIKDEDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLQVSIKTDDIARRSIVDPAVHKECSDESLMTMMEICVRCLSGDPTERPSVEDILWNLQFAAQVQNSWRRDSSDHSYSPAPSSRET* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1808 836 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 433 - -
Gso15g1808 836 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 477 827 - -
Gso15g1808 836 Gene3D Ribonuclease Inhibitor 242 378 IPR032675 -
Gso15g1808 836 Gene3D Ribonuclease Inhibitor 152 241 IPR032675 -
Gso15g1808 836 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 433 - -
Gso15g1808 836 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 477 827 - -
Gso15g1808 836 Gene3D Transferase(Phosphotransferase) domain 1 620 828 - -
Gso15g1808 836 SUPERFAMILY Protein kinase-like (PK-like) 516 810 IPR011009 -
Gso15g1808 836 Gene3D Phosphorylase Kinase; domain 1 497 619 - -
Gso15g1808 836 ProSiteProfiles Protein kinase domain profile. 537 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1808 836 SUPERFAMILY RNI-like 66 342 - -
Gso15g1808 836 Gene3D Ribonuclease Inhibitor 30 151 IPR032675 -
Gso15g1808 836 Pfam Protein kinase domain 540 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1808 836 ProSiteProfiles Leucine-rich repeat profile. 203 225 IPR001611 GO:0005515
Gso15g1808 836 Pfam Leucine Rich repeats (2 copies) 203 235 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1808 Gso-Chr15 36119723 36125610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1808 44 833 Miscellaneous Gene Families AT3G03770 51.815 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso15g1808 Pkinase 7.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1808 - - gmx:100797327 1557.73