Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1787 ATGATGGAACCTAAGAATGAGGAGTTCCAGTCTGGATCTCAATCAGTAATTCAAGACCATATGGATGGCATGCATACTATCAGAAGACCATCTGACTATAACATGTCAGATGTTAAACCTGTACTTAATTATTCAATACAGACAGGTGAGGAATTTGCTCTTGAATTCATGCGAGATAGGGTGAATCTGAGGAAGCCTGTATTTTCAAATGTTAGTGATTCCAATTCCAATTATGCAACTGGTTGTATGGAACTGAAAGGCGTATTAGGAATCAGTCATGCAGCATCTGAAAGTGGGTCTGACATTTCTATGCTTTCAAAAGCCGAGAAAGGTCCAACAGAGTTTAACAGACAGAGTACATCATTACATGGAGAGGGAAGCAATTATGGGTCAATTCGATCCATACCAAGAACTTCATTGAATCAGGAGAATAGTCGATTCGTATGTGAGTATGGCTCTTCTGTTGGTTCTGACAGCTCATCAACAATGATGAAGTGTCTCTGTAGCTTTGGTGGCAGAATATTACCTCGACCAAGTGATGGAAAGCTAAGGTATGTTGGAGGTCAAACTCGTATTCTTCGTCTAAGAAAGGACATATCTTGGCAGGAGCTTTTGCAGAAAGCATTGGTAATGTATAATCTGGTTCATGTACTAAAATATCAACTTCCTGGGGAAGATCTTGATGCTTTGGTATCAGTATCCTCTGAAGAGGATTTGCAGAATATGATGGAGGAATGTAATCTTCTAGACAATAGAGAACGCTCTCAAAAACTTAGGTTGTTTTTGTTCTCATTGAGTGATTTAGAAGATGCTCAGTTTGTTCTCAGTAGCATTGGTGGTGATTCTGAGATCCAATATGTTCTTGCTGTTAATGCCATGGACTTTGGATCGATAAACAGCTCAACCCCACTAGGTGTCAGTTTTTCAGCAGATGATCTAAATGAATTGGAAAGGCAAACTGCGGAGAGGGAGACTAGTAGAGTTGCTGCAGAATCTATAGGTGTCAGCAATGCTCCATTGACTAATAAATCTGATTCTTCATTGACTATTCATTCTTCACAACCAGTTCTACCAAATGCCTCAAATGCTTATGAAATCAATCAACTGTCTTATGGTGACCAAATGATGCAAGTTTGGGAATATAGTCGTCAATATTTTGTTCACCATGGCCTTAATTCCAGTCATAACCCTGTTGTTGGAGAGACTTCTATTCCTATGGCTCCTCATCTGCTGAACAGCCAACAAGGGGTTCTGAATGAAGATAATCTATCTAGTGGATTACAAATACAAAATTCTCAGTTATCTACAGTGCAGGTGAAACAAGGAAGTGACCCTGGTAAAGTTTTATCCTCAGAAACCCCATCCCCAGCCATCTCACAGCCTATTGATAGTTACTTGAAAAGTAATTTTCCTGAAGCACCGGTTGTAGTTAGCATGCCTGAGGGGCTTCCACCTTCATTGCCTTCAACAAAAAAGGTTCAGCACAAGGATTATGAACAGGTCTCTTCTACTTCTAGCAGTGCATTTGTTCCTTCTTATGTTGATTCCCACACCAATGCAATTGATTTGAGTTGTCTTCATCCTCCTCCGCTTCCTGAGAGAGTTTACTATTCAGAAAGAACTCCGAGGGAGCAAGTGGAGTTACTGAATCGTTCTTCCAAGTCAGATGACACACACAATTCTCAAATTCATGTGTCAGATTTACTTTCCGATGTCAACCCAGAGAATCCAGTAACAGAATCTGGTGACAACTTGCATGATGGTAAAATGTTAAATCCTACTGAGGAATTGGGTACTGTGGCAAAGCCCTTGCTTGCAGATGGCCTTACCATTGACAATGGGTTTTCCAAAAATCAAATGAGCAAACCATTGCCTGATACAAACAGTCTGGTTAAGTCAAAACTTTCTGAGCACACAGATCCTGAATTGAAGTCAGTGTTGCCAAGCAATGAAGGAACTGAAAATTATCGTAAAGATAACCACACCAAGCTCTTGGTTGATGAAACCGAAACCAAAGGTGGTAAATCAGATCTTCCTGCTTTGCATCATGTTTCCTCTGGGAAGCGTCTTGATGATCTAGCATCCAATCTTCCTGAGATTGATTGGGGTGAAGCCTCAGGGAAGGAATCCAATGATGGTTGTATGGTACAAGAACTACCTGTATCTGTAACTGGGAACATAACCAAAGATATTTATCAAGATTTCCCTCCAACGGTTGTTTCTGAACAATCTCAAGGTGATATTCTTATTGATATTGATGATCGATTTCCCCGGGAAATACTTTCTGATATGTTTTCTAAAGCAATACTTGGAGAAGATCCCTCCAGTCTACATCCACTTCCCGGAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAACCTAAAAGATGGTCATATTTTCATAAGTTAGCACAAGAAGGGATTGATAATGTCTCTCTAATTGATCAGGATCATGCTGGTTTTTCACCTGTGATAGGAAAAGCAGGAGATAATAGAACCCATCATGTTACACTGCTAACAACTGATGGACATCCTCTACATCATGAAGATTCCCATCTTGATTTCAATGAAGAAAATCAAGAGGACTTGCATAGAAGGATTGGAACTGAAACCACTGTTCTGAAGTCTAATTATAATCAATCCCAACTTAAGGAAAATGAGAGTATGCAGTTTGATGCTATGATGGAAAATCTAAGAATGCAAGAGTCAGAGTTTGAGGATGGCAAATTTGATGCAAAAAATAGCAATCTACCTCCACTTGATTCTTCTTTCGGAGATTTAAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGCTGCGAGAACTAGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTAGAGTTCTGGCGGGAAGCTGACATTCTTTCCAATCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGAGGAACAATGGCCACTGTGGCAGAATATATGGTGGATGGTTCTCTTAGGCATGTTTTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTCGACTTGAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGACCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAACGAAATACCTTGGTTACTGGTGGTGTGCGTGGGACTCTACCTTGGATGGCACCAGAACTTCTGAATGGCAGCAGCAACAAGGTCTCTGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTACTATGGGAAATTCTGACTGGTGAGGAGCCATATGCTAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAACACATTAAGGCCAACCATCCCAAGTAACTGTGATCATGAATGGAGAACACTAATGGAACAATGTTGGGCACCCAATCCTGGAGCCAGACCCTCCTTCACAGAAATCACCAGTCGTTTGCGCATAATGTCCGCTGCAGCTAGCCAAACCAAAACACAGGGCAATAAAGCATCTAAATGA 3669 0.4047 MMEPKNEEFQSGSQSVIQDHMDGMHTIRRPSDYNMSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPVFSNVSDSNSNYATGCMELKGVLGISHAASESGSDISMLSKAEKGPTEFNRQSTSLHGEGSNYGSIRSIPRTSLNQENSRFVCEYGSSVGSDSSSTMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISWQELLQKALVMYNLVHVLKYQLPGEDLDALVSVSSEEDLQNMMEECNLLDNRERSQKLRLFLFSLSDLEDAQFVLSSIGGDSEIQYVLAVNAMDFGSINSSTPLGVSFSADDLNELERQTAERETSRVAAESIGVSNAPLTNKSDSSLTIHSSQPVLPNASNAYEINQLSYGDQMMQVWEYSRQYFVHHGLNSSHNPVVGETSIPMAPHLLNSQQGVLNEDNLSSGLQIQNSQLSTVQVKQGSDPGKVLSSETPSPAISQPIDSYLKSNFPEAPVVVSMPEGLPPSLPSTKKVQHKDYEQVSSTSSSAFVPSYVDSHTNAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHNSQIHVSDLLSDVNPENPVTESGDNLHDGKMLNPTEELGTVAKPLLADGLTIDNGFSKNQMSKPLPDTNSLVKSKLSEHTDPELKSVLPSNEGTENYRKDNHTKLLVDETETKGGKSDLPALHHVSSGKRLDDLASNLPEIDWGEASGKESNDGCMVQELPVSVTGNITKDIYQDFPPTVVSEQSQGDILIDIDDRFPREILSDMFSKAILGEDPSSLHPLPGDGVGLSINMENHEPKRWSYFHKLAQEGIDNVSLIDQDHAGFSPVIGKAGDNRTHHVTLLTTDGHPLHHEDSHLDFNEENQEDLHRRIGTETTVLKSNYNQSQLKENESMQFDAMMENLRMQESEFEDGKFDAKNSNLPPLDSSFGDLSTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSNLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDHEWRTLMEQCWAPNPGARPSFTEITSRLRIMSAAASQTKTQGNKASK* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1787 1222 SMART PB1_new 178 265 IPR000270 GO:0005515
Gso15g1787 1222 MobiDBLite consensus disorder prediction 435 462 - -
Gso15g1787 1222 MobiDBLite consensus disorder prediction 565 586 - -
Gso15g1787 1222 CDD PB1_UP2 167 263 - -
Gso15g1787 1222 Pfam Protein tyrosine and serine/threonine kinase 941 1203 IPR001245 GO:0004672|GO:0006468
Gso15g1787 1222 MobiDBLite consensus disorder prediction 635 659 - -
Gso15g1787 1222 Gene3D Transferase(Phosphotransferase) domain 1 1028 1222 - -
Gso15g1787 1222 MobiDBLite consensus disorder prediction 565 580 - -
Gso15g1787 1222 PANTHER SERINE-THREONINE PROTEIN KINASE 83 1222 - -
Gso15g1787 1222 SMART serkin_6 940 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1787 1222 CDD STKc_MAP3K-like 946 1203 - -
Gso15g1787 1222 Gene3D Phosphorylase Kinase; domain 1 933 1027 - -
Gso15g1787 1222 SUPERFAMILY CAD & PB1 domains 179 267 - -
Gso15g1787 1222 Gene3D - 182 265 - -
Gso15g1787 1222 ProSitePatterns Protein kinases ATP-binding region signature. 946 971 IPR017441 GO:0005524
Gso15g1787 1222 SUPERFAMILY Protein kinase-like (PK-like) 930 1203 IPR011009 -
Gso15g1787 1222 PRINTS Tyrosine kinase catalytic domain signature 1022 1035 IPR001245 GO:0004672|GO:0006468
Gso15g1787 1222 PRINTS Tyrosine kinase catalytic domain signature 1059 1077 IPR001245 GO:0004672|GO:0006468
Gso15g1787 1222 PRINTS Tyrosine kinase catalytic domain signature 1130 1152 IPR001245 GO:0004672|GO:0006468
Gso15g1787 1222 PRINTS Tyrosine kinase catalytic domain signature 1174 1196 IPR001245 GO:0004672|GO:0006468
Gso15g1787 1222 PANTHER - 83 1222 - -
Gso15g1787 1222 Pfam PB1 domain 180 264 IPR000270 GO:0005515
Gso15g1787 1222 ProSiteProfiles Protein kinase domain profile. 940 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1787 1222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1065 1077 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1787 Gso-Chr15 34376159 34384900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1787 34 614 MAP Kinase Kinase Kinase AT1G16270 36.433 1.63e-81 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gso15g1787 PK_Tyr_Ser-Thr 3.9e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1787 - - gmx:100816522 2432.91