Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1785 ATGAAAGGCATAAACAGGTGGCTATCCTTCTATATGGATGAAAGTGTTAACCACGATTTCGCCATCCGAAGGTATTGCCCTGCAAGAATGGAGCAAGAGCAAGGAGGAGATAAGTGCCAAGACCAAGAGGCACTAGTTTTTTATGACACTGAATTATGTTCTTCTGATGCTACCAGCAGCACTCCTTGTTTGGCTTCATCTGAGGTTGATGACTTTGTTGATAGCTTCATCAACATGGATCAGTATGAGTACGTGAATGAAGATCAAGGGTTCCAAGAGAAGCATCGAAGTTTTGACCACTTTGTGGTGAATGATGAGGATGAGGCTGATGCATACTCCATTGTGAATGGTGTCTTTGAATATGTTCCAACCACCTTGGAGGATTCAGAATTGGAGATCTATGAAGATGTCACAACAGCCATGTTGGAGGAAGAGGTTGCAATGAATGGCTCTTTTTGTGCTATACCTGAGTTTGTTGTGCCTTGTACACAAGAGGCCAATCTTGGTGTGGACCAAGGGTTAGACTTGGTTCACATGCTTTTGGCCTGTGCTGAAGCTGTGGGGTGCAGAGACAACCAGCAGGCAGAGTTGCTTCTTAGCAGAATTTGGGCTTTGGCAAGTACTTCAGGAGACTCGCTGCAGCGAGTCTCCTACTGTTTTGCCAAAGGATTGAAGTGTAGGTTATCACTGCTTCCTCATAATGTCATTGCAAATGCTACACTTTCCAGTATGGATGTGCCTTTCATTACTAGGGAGAATAAGCTGGAAGCTTTTCAGCTTCTGTACCAAACCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATGCCAAGCATCACAAGGAAAGAGCTCAATACACATTGTTGATTTAGGAATGGAGCATACCCTTCAGTGGTCTTCCCTAATAAGGGCCCTTTCTTCAAGGCCTGAAGGGCCTCCAACACTCCGGATCACCGGATTAACTGGCAATGAAGAAAACTCAAAACTTCAAGCTAGTATGAATGTGCTTGTGGAAGAAGCAAGCTCATTGGGAATGCATCTTGAATTCCACATAATTTCTGAGCATTTAACTCCATGTCTTCTTACTATGGAGAAGCTGAACTTGAGAAAAGAAGAAGCTTTATGTGTCAATAGTATCTTGCAGTTGCACAAATATGTCAAAGAAAGTAGAGGCTATCTGAAGGAAATTCTTCTATCAATAAAGAAGTTAGGTCCAACTGCACTTACAGTGGTAGAGCAAGACACAAACCATAATGGCCCTTTCTTCCTTGGGAGATTTTTGGAATCACTGCACTATTACTCGGCCATATTTGATTCTCTTGAGGCAAGTATGACAAGAAATAGTCAACACAGGATGAAAATAGAGAGATTACATTTTGCAGAGGAAATTCAGAACGTTGTAGCTTATGAGGGTCCAGATAGAATAGAAAGACATGAAAGGGTAGACCAATGGAGAAGGCAATTAGGCCGAGCAGGATTTCAGGTAATGCCACTGAAGTGCACTAGTCAAGTTAGAATGATGCTTTCTGTTTATGACTGTGACGGATATACATTGTCCTATGAGAAAGGAAATCTTTTACTTGGGTGGAAAGGAAGGCCAGTAATGATGGCTTCTGCATGGCAAGTTGCAAGTGTGTGA 1650 0.4261 MKGINRWLSFYMDESVNHDFAIRRYCPARMEQEQGGDKCQDQEALVFYDTELCSSDATSSTPCLASSEVDDFVDSFINMDQYEYVNEDQGFQEKHRSFDHFVVNDEDEADAYSIVNGVFEYVPTTLEDSELEIYEDVTTAMLEEEVAMNGSFCAIPEFVVPCTQEANLGVDQGLDLVHMLLACAEAVGCRDNQQAELLLSRIWALASTSGDSLQRVSYCFAKGLKCRLSLLPHNVIANATLSSMDVPFITRENKLEAFQLLYQTTPYIAFGFMAANEAICQASQGKSSIHIVDLGMEHTLQWSSLIRALSSRPEGPPTLRITGLTGNEENSKLQASMNVLVEEASSLGMHLEFHIISEHLTPCLLTMEKLNLRKEEALCVNSILQLHKYVKESRGYLKEILLSIKKLGPTALTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMTRNSQHRMKIERLHFAEEIQNVVAYEGPDRIERHERVDQWRRQLGRAGFQVMPLKCTSQVRMMLSVYDCDGYTLSYEKGNLLLGWKGRPVMMASAWQVASV* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1785 549 Pfam GRAS domain family 176 545 IPR005202 -
Gso15g1785 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 547 IPR005202 -
Gso15g1785 549 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 3 547 - -
Gso15g1785 549 ProSiteProfiles GRAS family profile. 167 545 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1785 Gso-Chr15 34365878 34367987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1785 171 549 GRAS Transcription Factor Family AT1G66350 37.824 3.99e-76 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso15g1785 GRAS 8.4e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1785 - - gmx:100814931 1103.97