Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1749 ATGCCTGGGAACAAGTACAACGGCAACTCCAGCAACATTCCGACGAGCCGTTTGGAGCGGTTGTTGAGGGACAGAGAGCTGAGGAAGAGTGGGAGGGCGAGCGAGAACAATGGAGAAGCGATGGAGGAGGAGGTGGTGCGGTTGAGAGAAGAAGAGAGCGCGGCGGAGGCGGCGACGAAGGGGGCCGGTGGTGGGGAGGAGAGGCAAGAAACGAAGCCGTTTCGGCAGAGGCTGCTGGTGGTGGCTAACAGGCTGCCGGTGTCGGCGGTGCGGAAAGGAGAGGACGCGTGGTCGTTGGAGATGAGTGCCGGTGGCCTCGTCAGCGCGTTGTTAGGTGTGAAGGAGTTTGAGGCAAAGTGGATAGGTTGGGCCGGTGTGAACGTGCCAGATGAGATTGGACAGAAGGCACTTACTAAAGCCTTGGCTGAAAAGAGGTGTATTCCTGTATTTCTTGATGAAGAGATCGTTCATCAATATTACAATGGCTATTGCAACAACATATTGTGGCCACTTTTCCACTACCTTGGACTTCCACAAGAAGACCGCCTTGCCACCACACGCAGTTTTCAGTCTCAGTTTGAGGCGTATGAGAAAGCAAATCAGATGTTTGCTGATGTTGTGAACAGGCACTATGAAGAGGGTGATGTTGTTTGGTGTCATGATTACCATCTTATGTTCCTTCCCAAATGCTTAAAGACACATAACAAGAAAATGAAAGTTGGATGGTTTCTCCACACCCCTTTTCCATCTTCTGAAATTCACAGGACACTGCCGTCTCGTTCGGAGCTCCTGCATTCCGTTCTTGCCGCCGATTTAGTTGGTTTTCACACCTATGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAAGGTACACCTTACGGGGTTGAGTATCAAGGGAAGCTAACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCAGAACGATTTATACGTGCTCTTGACCTTCCTCCAGTACAAGATCACATCAAAGAACTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAGGAAAATGCTTATTGGCGTGATAAAGTTGTTTTGCTTCAAATTGCTGTCCCGACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATAGTTGGTCGAATCAACGGAAGATTTGGAACATTGACTGCTGTTCCTATACATCACTTGGATCGCTCACTTGACTTTCATGCACTATGTGCTTTGTATGCTGTTACGGATGTAGCACTAGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCACAATCTCTTGGTGCCGGGGCAATTCTTGTCAATCCTTGGAACATTACAGAAGTTGCTGCTGCAATTGCTCGGGCTCTTAATATGCCATCTGCTGAAAGAGAAAAGAGACATAAGCATAATTTTAATCATGTAATATCTCATACTGCTCAAGAATGGGCAGGAACTTTCGTAAGTGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACAAGACAAGTTCCACCTCGGCTTCCAACCAAGACTGCAATTGAAAGTTATCAGCAGTCAACTAATCGACTGCTCATTTTGGGATTCAGTGGAACTTTAACAGAACCAGTTGAGAAAACAGGTGATCAAATTAAAGAAATGGAACTGAAGGTTCATCCAAAATTGAGACAACCTTTGACAGCACTATGCAGTGATCCAAATACCACAGTTGTTGTGCTCAGTGGAAGCGGTAGACAAGTCCTAGATGATAACTTCAAAGAATACGACATGTGGTTGGCAGCTGAGAATGGAATGTTTTTACATCCTTCAAAGGGTGAGTGGATGACTACAATGCCAGAGCATCTGAATATGGAATGGGTTGATAGTGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCTCGGTCACATTTTGTTTTTGAAGAAAGGGAAACTTCACTTGTATGGAATTACAAATATTCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCAGTTGAAGTTGTTCAAGGGAGCCGATCCGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCTTGGGTGAGATAGTGCACAGTAAGTCCATGACATCACCAATTGATTATGTTCTTTGCATAGGACATTTTCTGGGGAAGGATGAGGATCTGTATTCATTTTTTGAGCCGGATCTTCCCTCAATTGGTGTGGGTCTTCCTCGAAGCAAGGTAACAACTGATGGAGTTAAGTTTCCTGTTGAGAGGAAACCATCTTTGAATGTTCCAGCTACTAAGAGTGGACCAAAATCATTTCCAAATAAGGCACAACGTCCAGTGTCAAATTCTGAGAAGAAAACAAATAACCATATATGCAGTACACCACGAAGGCCAGCGCCCGAAAAGGAATCATGGAACGTGCTTGACCTTAAGAAAGAGAATTACTTCTCTTGTGCTATTGGACGAACAAGAACAAATGCTCGGTATATACTCGATTCATCAGACGATGTCGTTTCGTTTCTGAAGGAACTAGCAGTTGCTTCTTCCCGCCTTTACCACTGA 2748 0.4451 MPGNKYNGNSSNIPTSRLERLLRDRELRKSGRASENNGEAMEEEVVRLREEESAAEAATKGAGGGEERQETKPFRQRLLVVANRLPVSAVRKGEDAWSLEMSAGGLVSALLGVKEFEAKWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYEKANQMFADVVNRHYEEGDVVWCHDYHLMFLPKCLKTHNKKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQDHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIARALNMPSAEREKRHKHNFNHVISHTAQEWAGTFVSELNDTVIEAQLRTRQVPPRLPTKTAIESYQQSTNRLLILGFSGTLTEPVEKTGDQIKEMELKVHPKLRQPLTALCSDPNTTVVVLSGSGRQVLDDNFKEYDMWLAAENGMFLHPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFVFEERETSLVWNYKYSDVEFGKLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYSFFEPDLPSIGVGLPRSKVTTDGVKFPVERKPSLNVPATKSGPKSFPNKAQRPVSNSEKKTNNHICSTPRRPAPEKESWNVLDLKKENYFSCAIGRTRTNARYILDSSDDVVSFLKELAVASSRLYH* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1749 915 MobiDBLite consensus disorder prediction 822 864 - -
Gso15g1749 915 Gene3D Glycogen Phosphorylase B; 68 323 - -
Gso15g1749 915 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 32 907 IPR001830 GO:0003824|GO:0005992
Gso15g1749 915 Pfam Trehalose-phosphatase 596 799 IPR003337 GO:0003824|GO:0005992
Gso15g1749 915 CDD HAD_TPP 575 808 - -
Gso15g1749 915 MobiDBLite consensus disorder prediction 826 856 - -
Gso15g1749 915 Gene3D - 664 746 - -
Gso15g1749 915 SUPERFAMILY HAD-like 574 907 IPR036412 -
Gso15g1749 915 Pfam Glycosyltransferase family 20 77 542 IPR001830 GO:0003824|GO:0005992
Gso15g1749 915 CDD GT20_TPS 77 542 IPR001830 GO:0003824|GO:0005992
Gso15g1749 915 Gene3D Glycogen Phosphorylase B; 324 526 - -
Gso15g1749 915 MobiDBLite consensus disorder prediction 18 56 - -
Gso15g1749 915 Coils Coil 38 58 - -
Gso15g1749 915 MobiDBLite consensus disorder prediction 1 17 - -
Gso15g1749 915 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 32 907 - -
Gso15g1749 915 Gene3D - 578 801 IPR023214 -
Gso15g1749 915 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 544 - -
Gso15g1749 915 MobiDBLite consensus disorder prediction 1 71 - -
Gso15g1749 915 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 77 542 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1749 Gso-Chr15 32830876 32865781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1749 1 911 Trehalose Biosynthesis Gene Families AT1G78580 77.306 0.0 1464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1749 K16055 - gmx:100797320 1796.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1972 12 43813703 43835789 Gso15g1749 15 32830876 32865781 GST