Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1741 ATGGGTGAGAAGAGCAACGTTGGCGGCGACGCGATTAACACGACACTGCTTCACGGGAAGTACGAGCTGGGCCGGCTGTTAGGCCACGGAACCTTCGCGAAGGTGTACCACGCGCGCCACCTGAAGACGGGAAAGAGCGTGGCGATGAAGGTGGTGGGCAAAGAGAAGGTGGTGAAGGTAGGCATGATGGAGCAGATCAAGAGAGAGATCTCAGCCATGAACATGGTGAAGCACCCAAACATCGTGCAGCTTCACGAGGTCATGGCGAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCAACAAGATCGCCAGAGGCCGTCTCCGGGAGGAGATGGCCAGACTTTACTTCCAACAACTCATCTCTGCTGTGGACTTCTGCCACAGCCGCGGCGTCTACCACCGTGACCTCAAGCCAGAGAACCTTCTCCTCGACGACGACGGCAACCTCAAGGTCACCGACTTCGGCCTCAGCACTTTCTCCGAGCACCTCCGGCACGACGGCCTGCTGCACACTACGTGCGGCACGCCGGCCTATGTCGCGCCCGAGGTGATTGGGAAAAGAGGCTACGACGGCGCCAAGGCCGATATTTGGTCTTGTGGCGTAATCCTCTACGTACTTCTTGCTGGTTTTTTACCCTTCCAGGATGACAACCTGGTGGCCTTGTACAAGAAAATTTACCGCGGTGACTTCAAGTGTCCGCCGTGGTTCTCCTCCGAGGCGCGGAGGCTCATCACCAAGCTCCTCGACCCCAACCCGAACACGCGAATCACAATTTCAAAAATCATGGACTCGTCGTGGTTCAAGAAACCCGTGCCGAAGAACTTGATGGGAAAGAAAAGAGAGGAATTGGATCTGGAGGAGAAGATTAAACAGCATGAGCAGGAGGTTTCTACTACGATGAATGCTTTTCACATCATTTCGCTCTCGGAGGGGTTCGATTTGTCGCCGTTGTTCGAGGAAAAGAAGAGAGAAGAGAAAGAGTTACGGTTTGCGACCACGCGCCCCGCGAGCAGCGTGATTTCGAGATTGGAAGATTTGGCGAAGGCGGTGAAGTTCGACGTGAAGAAGAGCGAGACTAAGGTGAGGTTGCAGGGTCAAGAAAAAGGGCGAAAAGGTAAACTCGCTATTGCTGCGGACTTGTACGCCGTGACGCCGTCGTTTTTGGTGGTGGAGGTTAAGAAGGACAACGGTGACACCTTGGAGTATAACCAGTTCTGTAGCAAGGAGCTTCGTCCAGCTCTTAAAGATATCGTGTGGAGGACTTCTCCTGCAGAGAATCCTACACTCGCTTGA 1317 0.5452 MGEKSNVGGDAINTTLLHGKYELGRLLGHGTFAKVYHARHLKTGKSVAMKVVGKEKVVKVGMMEQIKREISAMNMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREEMARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDDDGNLKVTDFGLSTFSEHLRHDGLLHTTCGTPAYVAPEVIGKRGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNTRITISKIMDSSWFKKPVPKNLMGKKREELDLEEKIKQHEQEVSTTMNAFHIISLSEGFDLSPLFEEKKREEKELRFATTRPASSVISRLEDLAKAVKFDVKKSETKVRLQGQEKGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWRTSPAENPTLA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1741 438 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1741 438 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1741 438 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 13 433 - -
Gso15g1741 438 Gene3D Kinase associated domain 1, KA1 302 428 - -
Gso15g1741 438 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Gso15g1741 438 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1741 438 PANTHER - 13 433 - -
Gso15g1741 438 Gene3D Phosphorylase Kinase; domain 1 18 102 - -
Gso15g1741 438 Pfam NAF domain 306 364 IPR004041 GO:0007165
Gso15g1741 438 Gene3D Transferase(Phosphotransferase) domain 1 103 279 - -
Gso15g1741 438 Coils Coil 283 310 - -
Gso15g1741 438 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Gso15g1741 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Gso15g1741 438 SUPERFAMILY Protein kinase-like (PK-like) 18 285 IPR011009 -
Gso15g1741 438 CDD CIPK_C 309 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1741 Gso-Chr15 31529688 31531767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1741 3 432 CBL-interacting serine-threonine protein kinases AT4G30960 73.409 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso15g1741 Pkinase 7.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1741 - K07198 gmx:547644 860.136