Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1718 ATGGGAAGAGAAGTGTTGTTGCCATCAGATACGTCTCAATACAGGGCTTATTTGCAAGATTCAGTCATAGAGCTGCTAGGAACAGAAAAGTCAAACAATGTGGTGATAGAGCATACTAAAGATGGATCTGGAATAGGAGCTGCTGTATTGGCTGCTTCAAACTCCATGTTGCGTGAATATGAAGTTGATGTTGATCGTTCTAAAAGACGTGGACCTGAGGTTGAAAGAATTTATTCCGTGATTCTAGAGATGGCATCTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAAATTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTCTGAATTGGTAGGGGCAGGGAAGGACATAGAAAGTGCTTATTGGGAATTGGTTGTGAAGGACATACAAGATACTTGCAAACTTCTGGAGCCAATTTACAATGAAACAGATGGGGAAGATGGACATGTATCTCTTGCAGTTTCCCCAAAGCTAGCAAATGACACCAAGGGGACAATTGAGGCAGCAAAATGGCTTCATAATATGGTTGGAAGTCCGTGTGTTTACATGAAAATTCCTGCCACTGATGAATCCATCTCTTCCATGAAGGAGGTCATTTCTCTGGGGATAAGTGTAAATGCCACTCTCATATTCTGCCTCCCTAAATATGAAGTAGTGATTGATGCTTACTTGGATGGCCTTGAGTCTTGTGGCATGACTGATCTCTCTAAGGTTTCAAGTGCAGCAGCATTCTACATCAGTAGAGTGGATGTTACACTTGACAAGAAACTTGAGCAAATTGGTACTTCTGAGGCTCTTGATCTCAAAGGAAAGGGTGCAGTTGCTCAAGCAGTCTTAGCATACCAACTTTACCAGAAAAAATTTTCTGGTCCAAGATGGGAACGCTTGGAGAATAGAGGTGCCAAGAAGCAGAGGTTGATGTGGGCTTCAACAAATGTGAAAAATCCATCTTACCCTGACACATTTTATGTTAATTCTGTTATTGGACCAGATACAGTAAGTTATATCGGTTTCCTTATTTTTTTACCTTGA 1158 0.4119 MGREVLLPSDTSQYRAYLQDSVIELLGTEKSNNVVIEHTKDGSGIGAAVLAASNSMLREYEVDVDRSKRRGPEVERIYSVILEMASVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVSELVGAGKDIESAYWELVVKDIQDTCKLLEPIYNETDGEDGHVSLAVSPKLANDTKGTIEAAKWLHNMVGSPCVYMKIPATDESISSMKEVISLGISVNATLIFCLPKYEVVIDAYLDGLESCGMTDLSKVSSAAAFYISRVDVTLDKKLEQIGTSEALDLKGKGAVAQAVLAYQLYQKKFSGPRWERLENRGAKKQRLMWASTNVKNPSYPDTFYVNSVIGPDTVSYIGFLIFLP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1718 385 PANTHER TRANSALDOLASE-RELATED 148 378 - -
Gso15g1718 385 SUPERFAMILY SpoIIaa-like 76 148 IPR036513 -
Gso15g1718 385 Pfam Transaldolase/Fructose-6-phosphate aldolase 148 375 IPR001585 GO:0005975
Gso15g1718 385 SUPERFAMILY Actin-like ATPase domain 12 55 IPR043129 -
Gso15g1718 385 Gene3D Aldolase class I 145 379 IPR013785 -
Gso15g1718 385 Gene3D STAS domain 48 144 IPR036513 -
Gso15g1718 385 SUPERFAMILY Aldolase 149 376 - -
Gso15g1718 385 Hamap Transaldolase [tal]. 148 385 IPR004732 GO:0004801|GO:0005737|GO:0006098
Gso15g1718 385 PANTHER TRANSALDOLASE 148 378 IPR001585 GO:0005975
Gso15g1718 385 Pfam Hexokinase 11 52 IPR022673 GO:0005524|GO:0005975|GO:0016773
Gso15g1718 385 CDD STAS_SulP_like_sulfate_transporter 65 143 - -
Gso15g1718 385 Pfam STAS domain 51 146 IPR002645 -
Gso15g1718 385 ProSiteProfiles STAS domain profile. 80 150 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1718 Gso-Chr15 30176143 30180544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1718 57 149 Inorganic Solute Cotransporters AT5G13550 73.118 1.68e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1718 K00616 - gmx:100811673 450.284