Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1695 ATGGAGATTTTCAAATGCTTCTACATCAAAAATCTTATTCTTGTTACCTTCTTCATGGTATCATCAGCAGTTCTAGCAATTGACCCTTACTCAGAGGCACTTCTCAGCCTAAAATCGGAGCTTGTAGATGATGACAACAGCTTGCACAATTGGGTGGTGCCCTCTGGAGGAAAATTAACTGGGAAATCCTATGCATGTTCTTGGTCCGGCATCAAGTGTAACAATGACTCAACAATTGTAACTTCCATAGACCTTTCCATGAAGAAATTGGGAGGTGTGGTTTCAGGGAAGCAATTCATCATCTTCACAAACCTCACTAGTCTCAACCTGAGCCACAATTTCTTCTCTGGGCAGCTCCCAGCTGAGATTTTCAACCTCACCAGCTTAACAAGCTTGGACATCAGCAGAAACAACTTTTCTGGTCCCTTCCCAGGTGGAATTCCTATACTCCAAAACTTGGTTGTGCTTGATGCCTTTAGCAACAGTTTTTCTGGGCCATTGCCTGCAGAATTTTCACAGCTTGAAAACCTTAAGGTTCTCAATCTAGCTGGGAGCTACTTCAGAGGTTCAATTCCACCTGAATATGGTTCTTTCAAGAGCCTTGAGTTTCTTCATCTTGCAGGAAATTCTCTAACAGGAAGCATACCTCCAGAACTTGGTCACCTCAAAACAGTGACCCACATGGAGATTGGCTACAACGAATACCAGGGTTTTATTCCTCCTGAATTAGGTAACATGAGTCAGCTTCAGTATCTTGACATTGCAGGAGCAAATCTTTCTGGTCCTATACCGAAGCAACTCTCCAACCTCACCAGTTTGCAATCCATTTTCCTTTTCAGAAACCAGCTCACAGGATCAATACCAAGTGAGCTTAGCATCATAGAACCTCTCACAGATTTAGATCTCTCTGATAACTTCCTTATAGGGTCCATTCCTGAAAGCTTCTCAGAGCTAGAGAACCTGAGGCTGCTCAGTGTCATGTACAATGACATGAGTGGCACTGTTCCTGAAAGCATTGCAAAACTTCCATCCTTGGAAACCCTTCTCATTTGGAACAACCGCTTCTCCGGCTCGCTTCCACCGAGCTTAGGCAGGAACTCCAAACTCAAGTGGGTGGATGCCTCTACAAATGATTTAGTTGGAAGCATACCACCAGACATTTGTGCGAGTGGAGAACTGTTTAAGCTGATCCTGTTTTCAAACAAATTCACAGGTGGCCTTTCATCAATCTCCAATTGTTCTTCCCTCGTTCGCCTTCGCCTCGAAGATAACTCATTCTCAGGAGAAATCACTTTGAAATTCAGCCATCTTCCTGATATCTTATATGTTGATCTGTCCAAGAACAACTTTGTTGGTGGGATTCCCTCAGATATTTCTCAAGCCACCCAACTGGAGTATTTCAATGTCTCTTATAATCCGCAATTAGGAGGCATCATCCCTTCCCAAACATGGTCATTGCCCCAACTTCAGAATTTTTCAGCATCTTCTTGTGGTATTTCTAGTGATCTTCCCCTATTTGAATCCTGCAAATCAATTTCAGTTATTGATCTAGATAGCAATAGCTTATCTGGAACCATCCCAAACGGTGTTTCCAAATGTCAAGCTCTTGAGAAAATCAACCTATCCAACAATAATCTGATAGGTCATATACCTGATGAGCTTGCCTCTATTCCTGTTCTTGGTGTAGTGGACCTATCAAACAACAAGTTCAATGGCCCCATACCAGCCAAGTTTGGTAGTTCTTCAAATTTACAACTCCTCAATGTGTCTTTCAACAATATCTCTGGTTCAATACCAACAGCAAAGTCATTCAAATTGATGGGAAGAAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGCACCATTGCAACCATGTCCTGATTCAGTTGGAATATTGGGAAGCAAAGGCACGTGGAAGGTTACACGTATTGTGCTTCTCTCTGTAGGGTTGTTAATAGTCCTTCTGGGACTTGTTTTTGGAATTCTTTACTTGAGAAGGGGAATCAAAAGTCAATGGAAGATGGTCTCATTCGCTGGTCTACCTCAATTCACAGCAAACGATATTTTGACAAGCCTCAGTGCCACAACAAAACCTACAGATATTCAATCACCATCAGTTACAAAGACTGTTCTGCCTACAGGAATAACAGTTTTGGTCAAGAAGATTGAATTGGAAGCAAGAAGCATAAAGGTTGTGTCAGAATTTATAATGAGGCTAGGAAATGCAAGGCACAAGAACTTAATCAGATTGTTGGGGTTCTGCCACAACCAGCACCTAGTCTATCTTTTGTATGATTACTTGCCCAATGGGAATTTGGCTGAGAAAATGGAAATGAAATGGGATTGGGCAGCAAAATTCAGAACAGTGGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCTATACCCCATGGAGACTTGAGGCCTAGCAACATTGTATTCGATGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACATGTGTCGAGGTGGAGCAAAGGCTCATCACCCACCACAACTAAGTGGGAAACAGAATACAATGAAGCCACAAAAGAGGAACTGAGCATGGATATCTACAAATTTGGGGAGATGATTCTGGAAATTTTAACCAGGGAAAGGTTGGCAAATTCAGGAGCCAGCATACACAGCAAACCATGGGAGGTTCTCTTAAGAGAAATTTACAATGAGAATGGAGCAAGTTCGGCAAGTTCATTGCAAGAGATTAAACTTGTTCTTGAGGTAGCAATGCTTTGCACCCGAAGCAGGTCATCTGACCGGCCATCCATGGAAGATGTTCTTAAGCTTCTGTCAGGGTTAAAACATCTAGAGGATGGAAGAACTTCGAAAGAAGGGCAATAA 2883 0.4239 MEIFKCFYIKNLILVTFFMVSSAVLAIDPYSEALLSLKSELVDDDNSLHNWVVPSGGKLTGKSYACSWSGIKCNNDSTIVTSIDLSMKKLGGVVSGKQFIIFTNLTSLNLSHNFFSGQLPAEIFNLTSLTSLDISRNNFSGPFPGGIPILQNLVVLDAFSNSFSGPLPAEFSQLENLKVLNLAGSYFRGSIPPEYGSFKSLEFLHLAGNSLTGSIPPELGHLKTVTHMEIGYNEYQGFIPPELGNMSQLQYLDIAGANLSGPIPKQLSNLTSLQSIFLFRNQLTGSIPSELSIIEPLTDLDLSDNFLIGSIPESFSELENLRLLSVMYNDMSGTVPESIAKLPSLETLLIWNNRFSGSLPPSLGRNSKLKWVDASTNDLVGSIPPDICASGELFKLILFSNKFTGGLSSISNCSSLVRLRLEDNSFSGEITLKFSHLPDILYVDLSKNNFVGGIPSDISQATQLEYFNVSYNPQLGGIIPSQTWSLPQLQNFSASSCGISSDLPLFESCKSISVIDLDSNSLSGTIPNGVSKCQALEKINLSNNNLIGHIPDELASIPVLGVVDLSNNKFNGPIPAKFGSSSNLQLLNVSFNNISGSIPTAKSFKLMGRSAFVGNSELCGAPLQPCPDSVGILGSKGTWKVTRIVLLSVGLLIVLLGLVFGILYLRRGIKSQWKMVSFAGLPQFTANDILTSLSATTKPTDIQSPSVTKTVLPTGITVLVKKIELEARSIKVVSEFIMRLGNARHKNLIRLLGFCHNQHLVYLLYDYLPNGNLAEKMEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLRPSNIVFDENMEPHLAEFGFKHVSRWSKGSSPTTTKWETEYNEATKEELSMDIYKFGEMILEILTRERLANSGASIHSKPWEVLLREIYNENGASSASSLQEIKLVLEVAMLCTRSRSSDRPSMEDVLKLLSGLKHLEDGRTSKEGQ* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1695 960 Pfam Leucine Rich Repeat 104 123 IPR001611 GO:0005515
Gso15g1695 960 SUPERFAMILY RNI-like 82 404 - -
Gso15g1695 960 PANTHER UNNAMED PRODUCT 5 949 - -
Gso15g1695 960 SUPERFAMILY Protein kinase-like (PK-like) 707 947 IPR011009 -
Gso15g1695 960 Pfam Protein tyrosine and serine/threonine kinase 714 943 IPR001245 GO:0004672|GO:0006468
Gso15g1695 960 ProSiteProfiles Protein kinase domain profile. 673 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1695 960 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Gso15g1695 960 Pfam Leucine rich repeat 297 355 IPR001611 GO:0005515
Gso15g1695 960 ProSitePatterns Tyrosine protein kinases specific active-site signature. 808 820 IPR008266 GO:0004672|GO:0006468
Gso15g1695 960 Gene3D Phosphorylase Kinase; domain 1 693 765 - -
Gso15g1695 960 SMART LRR_typ_2 102 126 IPR003591 -
Gso15g1695 960 SMART LRR_typ_2 198 222 IPR003591 -
Gso15g1695 960 SMART LRR_typ_2 342 366 IPR003591 -
Gso15g1695 960 SMART LRR_typ_2 270 294 IPR003591 -
Gso15g1695 960 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 5 949 - -
Gso15g1695 960 SUPERFAMILY L domain-like 297 619 - -
Gso15g1695 960 Gene3D Ribonuclease Inhibitor 186 295 IPR032675 -
Gso15g1695 960 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Gso15g1695 960 Gene3D Transferase(Phosphotransferase) domain 1 766 958 - -
Gso15g1695 960 Gene3D Ribonuclease Inhibitor 297 630 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1695 Gso-Chr15 26872898 26876592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1695 14 945 Receptor kinase-like Gene Family AT5G51350 54.334 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso15g1695 PK_Tyr_Ser-Thr 8.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1695 - - gmx:100782323 1872.44