Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1681 ATGAAGCATTTTTCTCTCGTTTCACTTGTATTTTGGTCTATATATGTTCACCTGTTTTCTCTATTAACATTGAACTTACTATGGTTCAACCCAAACATGATTGCCTTTGCATCAGGAAATGATACTGATTATTTGGCACTGCTTAAATTCCGGGAATCCATATCCAGTGACCCACTTGGAATCTTGCTTTCTTGGAATAGTTCTTCTCACTTTTGTAATTGGCATGGAATCACATGCAATCCCATGCATCAAAGAGTTACAAAGTTAGACTTGGGAGGATACAAGTTGAAGGGTTCCATATCTCCCCACATAGGCAATCTCTCCTACATGAGAATCTTCAACCTCAACAAAAACTACTTGTATGGGAACATCCCACAAGAATTGGGACGGTTGTCACAATTGCAGAACTTCTCTGTGGGAAATAACTCATTGGAAGGGAAAATTCCTACAAACTTGACAGGTTGCACTCATCTCAAACTCCTAAACTTATATGGGAACAATCTGATTGGCAAAATACCGATTACAATTGCCTCACTACCGAAGCTTCAACTTCTGAATGTCGGGAACAATAAGTTAACTGGAGGAATCCCACCATTCATAGGGAATCTTTCTGCTCTACTTTATCTCTCAGTGGAGAGTAATAACATAGAGGGAGATGTTCCACATGAAATGTGCCAGCTAAACAACTTGATAAGGATACGGATGCCTGCCAACAAACTAACTGGAACATTTCCTTCATGTCTTTGTAATGTCTCATCTCTCATCGAAATCTCAGCTACAGATAATCAATTTCATGGCTCTCTTCCACCTAACATGTTCCACACCCTCCCAAATCTCCAACGATTTTATGTTGCGCTCAACCAAATCTCAGGTTCAATCCCACCTTCCATCATAAATGTGTCTAAGCTTTCAGTACTTGAGATTAGTGGAAACCAATTCACAGGACAAGTTCCACCTCTAGGGAAGCTACGAGATCTTTTTCACCTAAGGTTGTCTTGGAACAAACTAGGTGACAATTCAGCTAATAATTTGGAGTTTTTAAAATCATTGACAAACTGTAGTAGGTTGGAAATGTTATCCATAGCTGACAATAATTTTGGAGGTCATTTGCCAAATTCTTTGGGCAATTTATCCACCCAACTCAATCAACTGAATCTTGGAGGTAATCAGATATCAGGAGAAATTCCAGAAACTATAGGAAATTTAATTGGCCTATCTTTCTTAACCATGCAAGATAACCGCATTGATGGGATTATCCCAACCACTTTTGGGAAGTTTCAAAAAATGCAAGTGTTAGATGTAAGTATAAACAAGTTGTTAGGAGAGATAGGAGCCTTCATAGGCAATCTCAGTCAATTGTTTCATTTGGAAATGGGTGAAAATATGTTAGAAGGAAATATTCCTCCAAGCATAGGAAACTGCCAAAAGTTACAATACTTAAACCTTTCACAAAACAACCTTACAGGAACCATACCACTAGAGGTTTTTAATCTTTCCTCTTTGACAAACTTGTTGGATTTGTCATACAACTCATTGAGCAGTAGTATACCAGAAGAAGTGGGAAACTTAAAGCATATCAATTTGATAGATGTGTCCGAGAATCATCTGTCTGGTTACATTCCTGGAACCCTCGGAGAATGCACAATGTTGGAGTCCCTTTATTTGAAAGGAAATACTTTACAAGGAATCATACCATCCTCTTTGGCATCACTTAAAGGTCTTCAACGTTTAGACCTGTCACGAAATCACTTGTCTGGATCAATTCCTGATGTTCTGCAAAACATTTCTTTCTTAGAATATTTCAATGTATCTTTTAACATGTTGGAAGGTGAGGTGCCAACTGAAGGTGTCTTTCGAAATGCAAGTGGATTTGTGATGACTGGAAATAGTAATCTTTGTGGAGGTATTTTCGAACTGCATCTGCCACCATGCCCTATCAAAGGTAAGAAACTTGCCCAACACCACAAGTTTTGGTTGATAGCAGTGATAGTTAGTGTGGCTGCTTTTCTTCTCATACTTTCGATTATTCTAACTATCTACTGGATGAGAAAAAGAAGTAACAAACTATCTTTGGATTCACAAACAATTGACCAGCTGGCTAAAGTTTCATACCAAAGCTTGCACAATGGAACTGATGGTTTCTCAACAACAAACTTGATAGGCTCTGGAAATTTTAGCTCTGTCTACAAAGGAACTCTTGAGTTAGAAGACAAAGTTGTTGCAATAAAGGTCCTAAACCTTCAAAAAAAAGGAGCACGCAAGAGTTTCATTGCTGAATGCAATGCCCTTAAAAGTATTAAACATCGAAATCTGGTTCAGATTTTAACGTGTTGCTCCAGCACAGATTACAAAGGCCAAGAATTTAAAGCTTTGATATTTGAGTACCTGAAAAATGGGAGCCTAGAACAGTGGCTGCATCCAAGGACATTAACTCCTGAAAAGCCAGGAACATTGAACCTTGACCAAAGATTAAATATCATGATTGATGTTGCTTCTGCAATACATTATCTTCATCATGAATGTAAGGAGTCGATTATTCATTGTGATTTAAAGCCGGGCAATGTACTTCTTGATGATGATATGACTGCTCACGTGAGTGATTTTGGCTTAACAAGACTTCTTTCAACTATTAATGGTGCCACTTCTAAGCAAACAAGTACAATTGGAATAAAGGGGACTGTTGGCTACATTCCTCCAGAGTATGGAGTGGGTTGTGAGGTATCTACGAATGGCGACATGTATAGCTTTGGGATTCTTATCTTGGAAATGCTTACGGGAAGAAGACCCACAAATGAAATCTTTGAAGATGGTCAAAATTTGCACAACTTTGTGGAAAATTCATTTCCTGATAATCTTTTACAGATTTTGGATCCATCACTTGCACTGAAACATGAAGAAGCAACAATAAACGAAGACCATAATCAGAAACTTACTCCAAGTGTTGAAAAATGCTTAGTTTCGCTCTTTAAGATTGGACTTGCTTGTTCAGTGAAATCACCAAAAGAAAGAATGAATATGATGGATGTCACTAGAGAGCTAAGCAAAATTAGAACCACCTTTCTTTCGGGTTAA 3072 0.3805 MKHFSLVSLVFWSIYVHLFSLLTLNLLWFNPNMIAFASGNDTDYLALLKFRESISSDPLGILLSWNSSSHFCNWHGITCNPMHQRVTKLDLGGYKLKGSISPHIGNLSYMRIFNLNKNYLYGNIPQELGRLSQLQNFSVGNNSLEGKIPTNLTGCTHLKLLNLYGNNLIGKIPITIASLPKLQLLNVGNNKLTGGIPPFIGNLSALLYLSVESNNIEGDVPHEMCQLNNLIRIRMPANKLTGTFPSCLCNVSSLIEISATDNQFHGSLPPNMFHTLPNLQRFYVALNQISGSIPPSIINVSKLSVLEISGNQFTGQVPPLGKLRDLFHLRLSWNKLGDNSANNLEFLKSLTNCSRLEMLSIADNNFGGHLPNSLGNLSTQLNQLNLGGNQISGEIPETIGNLIGLSFLTMQDNRIDGIIPTTFGKFQKMQVLDVSINKLLGEIGAFIGNLSQLFHLEMGENMLEGNIPPSIGNCQKLQYLNLSQNNLTGTIPLEVFNLSSLTNLLDLSYNSLSSSIPEEVGNLKHINLIDVSENHLSGYIPGTLGECTMLESLYLKGNTLQGIIPSSLASLKGLQRLDLSRNHLSGSIPDVLQNISFLEYFNVSFNMLEGEVPTEGVFRNASGFVMTGNSNLCGGIFELHLPPCPIKGKKLAQHHKFWLIAVIVSVAAFLLILSIILTIYWMRKRSNKLSLDSQTIDQLAKVSYQSLHNGTDGFSTTNLIGSGNFSSVYKGTLELEDKVVAIKVLNLQKKGARKSFIAECNALKSIKHRNLVQILTCCSSTDYKGQEFKALIFEYLKNGSLEQWLHPRTLTPEKPGTLNLDQRLNIMIDVASAIHYLHHECKESIIHCDLKPGNVLLDDDMTAHVSDFGLTRLLSTINGATSKQTSTIGIKGTVGYIPPEYGVGCEVSTNGDMYSFGILILEMLTGRRPTNEIFEDGQNLHNFVENSFPDNLLQILDPSLALKHEEATINEDHNQKLTPSVEKCLVSLFKIGLACSVKSPKERMNMMDVTRELSKIRTTFLSG* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1681 1023 SUPERFAMILY Protein kinase-like (PK-like) 688 1013 IPR011009 -
Gso15g1681 1023 PANTHER LRR RECEPTOR-LIKE KINASE 28 1021 - -
Gso15g1681 1023 SMART LRR_typ_2 402 425 IPR003591 -
Gso15g1681 1023 SMART LRR_typ_2 276 300 IPR003591 -
Gso15g1681 1023 SMART LRR_typ_2 450 474 IPR003591 -
Gso15g1681 1023 SMART LRR_typ_2 571 594 IPR003591 -
Gso15g1681 1023 SMART LRR_typ_2 179 203 IPR003591 -
Gso15g1681 1023 SMART LRR_typ_2 498 523 IPR003591 -
Gso15g1681 1023 SMART serkin_6 714 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1681 1023 Pfam Leucine Rich repeat 473 489 IPR001611 GO:0005515
Gso15g1681 1023 ProSiteProfiles Protein kinase domain profile. 714 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1681 1023 PANTHER OS04G0122200 PROTEIN 28 1021 - -
Gso15g1681 1023 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515
Gso15g1681 1023 ProSiteProfiles Leucine-rich repeat profile. 476 497 IPR001611 GO:0005515
Gso15g1681 1023 Pfam Protein kinase domain 716 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1681 1023 Gene3D Transferase(Phosphotransferase) domain 1 796 1020 - -
Gso15g1681 1023 Gene3D Ribonuclease Inhibitor 338 652 IPR032675 -
Gso15g1681 1023 Gene3D Ribonuclease Inhibitor 40 321 IPR032675 -
Gso15g1681 1023 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Gso15g1681 1023 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Gso15g1681 1023 Gene3D Phosphorylase Kinase; domain 1 694 795 - -
Gso15g1681 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Gso15g1681 1023 SUPERFAMILY L domain-like 41 336 - -
Gso15g1681 1023 SUPERFAMILY L domain-like 379 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1681 Gso-Chr15 26291564 26294878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1681 40 1023 Receptor kinase-like Gene Family AT3G47570 45.226 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso15g1681 Pkinase 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1681 - - gmx:100782685 1999.94