Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1673 ATGGCGTTTGAGCAAAACTCCGTTCCAGTGGCTCGGGTGGCGGAGGAGCCTCTCGTTTTACCGGCGACTACCGCGGCGGTTGCTGGCGCGGTGCCGATTTTCTACCCCGCGTCTGTGGCTGATGCTGGCTTGGTCGGAGTGGGGTATGGAAATGTGGCTTCGGTTGGTGGTGGTGGTGCTGCTGCCACGTGGTGTGTTCGCCCTGCTGTGCCTGTTCATAATCATAATCACTCTGTGAATCCTGCTGTTGGGTTCTCTCATGCTCCTAGTTTTACTAATAGGGTTGCTACTGCTGCTGGTGGTAGCAATGGTGTTGATGTTTCGGGTAGTTTTGTGGCTGCTTCTCATGGGTATCCTATGAATTTGGGAAGCAATTGGGTTGCCACGAGTAATGGTAATGGCTTGGATAGTAGTAATAGTAGTAATAGCATTAGCAATATTAATGGTAATGGTAGTGGTCTTCAGGGGAATGTCAAAGCCATTAGCAATGCTAGTGATCATGTTGGTGGTGTTGGGGTTGGTTCCATTTCGAATACCCCGGCAAGCCAGCGGACTGATCCGGTGAGTGAGGAGGGTGGGGATGATTCGGTTTCGGGACAGAAAATGAAGTTGATGTGTAGTTATGGGGGGAAGATTTTGCCGAGGCCTAGTGATGGGATGTTGAGATATGTTGGAGGGCATACGAGGATCATAAGTGTTAGGAGAGATGTGAGTTTTAATGATTTGGTGCAGAAGATGGTTGGTACATTTGGGCAAGCCGTGGTTATCAAATATCAGCTCCCTGATGAGGACCTTGACGCGTTGGTATCGGTGTCCTGCCCTGATGATCTGGAAAATATGATGGAGGAGTATGAGAGATTGATTGAGAGGTGTCCTGATGGGTCTCCCAAATTAAGGGTCTTTCTCTTTTGTGCAGCAGAACTTGATCCTTCTGGTATGGTACAGTTTGTGAATTTAGATGATGGTGGGATGAAATATGTTGAAGCTGTGAATGGAATTACTGATGGGATTGGTGGTAAACTCACAAGGAAAGCGAGTTATACAAGTGCAGCTTCTACCCAGAATTCTGATTTGAGTGGGGTAGATGCTCTTGATAGCTCAAATGCTGCTCGAGGGGATGTCAGTGGGGTACATGTACCTTTGTCTGGCACATTATCACCTGAGGGGATCGTAGTTGCTTCTCGTGATACTGCTGCTGCAAATTCTGTGGTTTCTGAGCCTGGAGTGTCTTACACAGATGCTTCTGTTGTTTCACTGGGCATTCGTGCAGTTAATTCTGGCCCAACTCACACTCCACCTGTCCAGAATGAGGTGGAGTTTGAAAAGTCTGTATCTGTTAATTTTTCTCATCCTCAATTTGGGGTCCAGCAACTTGGTTCGGAAATTCCACCATCTGCACCTTTGCAGACTTTTGTTGATACTCACCAGGAAGTTATGAACCATGCAGATTATGTCCAGCTGCCTCCCCATATGGGATTCCCAAATCCTCAGCTTTTAGGTAAGCCTTGTTCCATCTACTCCCAACAGTTTCATGATAATACTTCTCGTTTTGGGTCCCATCATGTAATCCCTGCAGTGCAAATGACCATGACTCAGCCCTTTTCTCATGCTGGTGTAAGACCAAGTGTTATTCAACCACAAACATTCATGCAACCACAGCAGAACCGTTTGGACCAATATAATGATGATAATACTTCAGGGTTAAGGATTCACCAGCTTCCTGCTGAACAAAGTTACAATGCATATCCGGTTCAAGTCCCTTTTGGAGGTAACTACGGCTGGGTTCATGTTCCTTTGGCAGAGCATGTGATTTTTCCTGATGCATTTGTTCCTCAACAACCAGTGATGATCCCTGAGAAAGTCCAAAGAGTGGAGGACTGTTATATGTGTCAGAAAAAGCTGCCTCATTCACATTCAGATCCTGTGGTTCAGGATCTTCGTAATAGCTGTGCTGGTACAATTCCTGATTCAGTCCCAAGTTTCTATAGTGTCCCTATGGGGGAGAACTCAAGGGCTCAAGCAACAAATATGGTTTTGGTGACTGCACCAATGAAGGAAGACAATATTGAACAAGCAGTTGAGACCAGACCCAAGGTCATTAGCAAATTGGATACTCCAGCTGGAGTACCTTCTACTGACACAACTGGACTTTCTTTGGAGTCTGAAGGTGAGAAGGTTTATATACAGAAGCTGGATTGGTCTGATCATCCCAGGAATGCTGTTGTCCAGGAAGCAGTTGTAAGAACAGGTGAAAAACAGTCACCAACTGATGGGCTGATGGGAACATCACCGCTGTCTTATCAAGATGATGTTGCCCGCCAGCATATTGTGCCAGTTGAAAACTGGGCTAAAGAGGATGCTCTTGTGGCTAAACCTGTTAATAATGATATACCTTTTGTTGGCGGCACATCTGTTGAAAATTCTGACTGTATGGTTCAACAATGTCCAACAGAATATACCAATGAACTTGCTAGCACTATTTCAAAAGCAGATGCTGTGGAGAATTGGATATCACAGGACCTTCTCAAACCTATTGATGGAAGGCTGGACAACCCGAAGATAGGCAATCCTGAAAATTTTCTAAATAATGATAAATTTGATTACAGCACTCAACATGCTGTAGAGAAGAAAGGGGTGGTTTCAGATAACAACCATGGCAAGTCAAAATTGACCACTGGTGCAAATCAAATTAATATGATGGATATGCTTCCTAGTTCTACAGTGGAATATAATGAAGTTACACAACCCCCTGTTTGGGGCATACCTGGATCAAATCCTCAGTCAAAGAGTGGAAACCTTCACAAGGATGATGCAGTTTTATCTTCAGTTCCCCCATCTGTTAGGCTTGGAGATGTGCAGGATTCTTCAAACTCACTTTTTAGCAATCAAGATCTCTGGAATATACACAGTACCTACTTTCCTCCACCAAGACCTAACAAAGTTGCATTGAAGAAAGAAACTTATTCTAATAAGGACCAGCTCTGTGAGATTCCAGGCAACAGTGGGGAACAAAATTTAGAATCTCAAATAGACAATGGCCTCTACCAGACATTCAAACAGAATTTAACTTTGGAAGAAGCTAAATCTGCCAAGGTCTCATCAGAAGACCGTCAACTTCAAGCTGTTGCCGAAGGTTTAGCTGCTTCTGTTCTGCACTCGAGCACTTCTTCAAATCTTGATTTGCATGCCAGGGATGTGTCCCATCATGAAGACACTGGCAATGAAGATGTTCAAAATAATCAAACAGATATACAGCATAATGATAAAACTCAGGATCTCAAAAGCCAGCTTCCAGAGAAGGCAAATTTTGGCTTTCCAGTATCAGATGTTGGAGCTTTGCAGGTTATAAAAAATTGTGACCTTGAAGAGCTGATAGAGCTGGGTTCTGGGACCTTTGGGACTGTATATCATGGAAAATGGAGGGGTACTGATGTTGCAATAAAGCGGATTAATGATAGGTGTTTTGCTGGAAAGCCTTCGGAGCAAGAGCGCCTGAGAGCAGATTTTTGGAATGAGGCAATCAAGCTTGCTGACTTGCATCATCCGAATGTGGTAGCATTCTATGGTGTTGTGCTTGATGGCCCCGGAGGTTCTGTGGCGACAGTAACGGAGTATATGGTTAATGGTTCTCTAAGAAATGCCTTGCAGAAGAATGGGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAATATAGTTCACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGGGATCCGCACCGCCCAATATGCAAGGTTGGTGACTTGGGCCTGTCCAAAGTGAAATGCCAGACTTTGATATCTGGTGGTGTTAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTGAACGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGACGTGTTTTCGTTTGGCATTGTCATGTGGGAACTCTTCACGGGAGAAGAGCCATATGCCGATTTGCACTATGGGGCCATCATAGGTGGTATTGTAAACAACACTTTACGACCTCCAGTTCCAGAATTTTGTGATCCAGAATGGAGATTGCTGATGGAGAGGTGCTGGTCATCAGAACCATCCGAAAGACCTTCCTTCACTGAGATTGCTAATGGATTACGTTCCATGGCAACCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTGCTGTACCACAAAGTCAAGTGCAGAAATGA 4236 0.4483 MAFEQNSVPVARVAEEPLVLPATTAAVAGAVPIFYPASVADAGLVGVGYGNVASVGGGGAAATWCVRPAVPVHNHNHSVNPAVGFSHAPSFTNRVATAAGGSNGVDVSGSFVAASHGYPMNLGSNWVATSNGNGLDSSNSSNSISNINGNGSGLQGNVKAISNASDHVGGVGVGSISNTPASQRTDPVSEEGGDDSVSGQKMKLMCSYGGKILPRPSDGMLRYVGGHTRIISVRRDVSFNDLVQKMVGTFGQAVVIKYQLPDEDLDALVSVSCPDDLENMMEEYERLIERCPDGSPKLRVFLFCAAELDPSGMVQFVNLDDGGMKYVEAVNGITDGIGGKLTRKASYTSAASTQNSDLSGVDALDSSNAARGDVSGVHVPLSGTLSPEGIVVASRDTAAANSVVSEPGVSYTDASVVSLGIRAVNSGPTHTPPVQNEVEFEKSVSVNFSHPQFGVQQLGSEIPPSAPLQTFVDTHQEVMNHADYVQLPPHMGFPNPQLLGKPCSIYSQQFHDNTSRFGSHHVIPAVQMTMTQPFSHAGVRPSVIQPQTFMQPQQNRLDQYNDDNTSGLRIHQLPAEQSYNAYPVQVPFGGNYGWVHVPLAEHVIFPDAFVPQQPVMIPEKVQRVEDCYMCQKKLPHSHSDPVVQDLRNSCAGTIPDSVPSFYSVPMGENSRAQATNMVLVTAPMKEDNIEQAVETRPKVISKLDTPAGVPSTDTTGLSLESEGEKVYIQKLDWSDHPRNAVVQEAVVRTGEKQSPTDGLMGTSPLSYQDDVARQHIVPVENWAKEDALVAKPVNNDIPFVGGTSVENSDCMVQQCPTEYTNELASTISKADAVENWISQDLLKPIDGRLDNPKIGNPENFLNNDKFDYSTQHAVEKKGVVSDNNHGKSKLTTGANQINMMDMLPSSTVEYNEVTQPPVWGIPGSNPQSKSGNLHKDDAVLSSVPPSVRLGDVQDSSNSLFSNQDLWNIHSTYFPPPRPNKVALKKETYSNKDQLCEIPGNSGEQNLESQIDNGLYQTFKQNLTLEEAKSAKVSSEDRQLQAVAEGLAASVLHSSTSSNLDLHARDVSHHEDTGNEDVQNNQTDIQHNDKTQDLKSQLPEKANFGFPVSDVGALQVIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELFTGEEPYADLHYGAIIGGIVNNTLRPPVPEFCDPEWRLLMERCWSSEPSERPSFTEIANGLRSMATKISPKGQNQQQQPAVPQSQVQK* 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1673 1411 MobiDBLite consensus disorder prediction 171 199 - -
Gso15g1673 1411 CDD STKc_MAP3K-like 1127 1382 - -
Gso15g1673 1411 PRINTS Tyrosine kinase catalytic domain signature 1203 1216 IPR001245 GO:0004672|GO:0006468
Gso15g1673 1411 PRINTS Tyrosine kinase catalytic domain signature 1240 1258 IPR001245 GO:0004672|GO:0006468
Gso15g1673 1411 PRINTS Tyrosine kinase catalytic domain signature 1311 1333 IPR001245 GO:0004672|GO:0006468
Gso15g1673 1411 PRINTS Tyrosine kinase catalytic domain signature 1355 1377 IPR001245 GO:0004672|GO:0006468
Gso15g1673 1411 SMART serkin_6 1121 1392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1673 1411 Pfam Protein tyrosine and serine/threonine kinase 1126 1382 IPR001245 GO:0004672|GO:0006468
Gso15g1673 1411 ProSitePatterns Protein kinases ATP-binding region signature. 1127 1158 IPR017441 GO:0005524
Gso15g1673 1411 Gene3D Phosphorylase Kinase; domain 1 1114 1208 - -
Gso15g1673 1411 Gene3D - 222 304 - -
Gso15g1673 1411 ProSiteProfiles Protein kinase domain profile. 1121 1388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1673 1411 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 158 892 - -
Gso15g1673 1411 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 947 1391 - -
Gso15g1673 1411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1246 1258 IPR008271 GO:0004672|GO:0006468
Gso15g1673 1411 SUPERFAMILY Protein kinase-like (PK-like) 1115 1382 IPR011009 -
Gso15g1673 1411 PANTHER SERINE-THREONINE PROTEIN KINASE 158 892 - -
Gso15g1673 1411 PANTHER SERINE-THREONINE PROTEIN KINASE 947 1391 - -
Gso15g1673 1411 CDD PB1_UP2 205 303 - -
Gso15g1673 1411 Pfam PB1 domain 221 303 IPR000270 GO:0005515
Gso15g1673 1411 SUPERFAMILY CAD & PB1 domains 217 306 - -
Gso15g1673 1411 MobiDBLite consensus disorder prediction 1388 1411 - -
Gso15g1673 1411 Gene3D Transferase(Phosphotransferase) domain 1 1209 1411 - -
Gso15g1673 1411 SMART PB1_new 216 303 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1673 Gso-Chr15 25572323 25583969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1673 137 676 MAP Kinase Kinase Kinase AT3G46920 37.838 1.58e-79 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gso15g1673 PK_Tyr_Ser-Thr 2.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1673 - - gmx:100776264 2748
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0672 13 20929478 20936141 Gso15g1673 15 25572323 25583969 PCT
Gso17g0553 17 5083745 5090042 Gso15g1673 15 25572323 25583969 PCT
Gso17g0884 17 8265036 8273485 Gso15g1673 15 25572323 25583969 PCT
Gso15g1673 15 25572323 25583969 Gso13g0672 13 20929478 20936141 PCT
Gso15g1673 15 25572323 25583969 Gso17g0553 17 5083745 5090042 PCT