Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1620 ATGCCACCAGCCGCAGGAGCCGTAGCCTTACACTCCTCCCTCTGCAACATCTCTTCCGACAAACCCTCTTCTCCACTAAGATCACCCCCCATCCACGTCTCCCCAAAGCCCAAGAGCCTCTTCCAAAACCACCCCTTATACACCCCAACCCACACAAAACTCTCCCTTGAATTCAAAGAGAAAATCCTCTGCCTTGAGGTAATGGGCGTTGATGCAGGCAAAGCACTGTCTCAAAACCCTGACCTCCGCACTGCCACCATGGAGTCCATCCACTGCATCATCACCTTCCTCCTCTCCAAAGGCCTCCAAGAAAAGGACCTACCCAGACTCTTTGGCATGTGCCCCAAGATTCTAACTTCTGACATCAAAACTGATCTCAACCCAGTTTTTGATTTCATCTTGAATGAACTTAAAGTCCCTGGAAATAATTTCAGGAGGGTTGTTAACAAGTGCCCCAGATTGCTCACATCAAGTGTCAAAGACCAGCTTAGACCTTGTTTGGTTTACTTGAGAAGGCTTGGGTTCAAGGACTTGGGGGCATTGGCTTATCAAGATTCTGTTTTGCTGGTTTCCAATGTGGAGAACACCCTCATTCCCAAACTCAAGTTTTTGGAGACTTTAGGGCTTTCCAAGGATGAGGTTAGGAGCATGGTGCTGAGGTGTCCAGCACTGCTCACTTTCAGCATAGAGAATAACTTTCAGCCAAAGTATGAGTACTTTGCTGGGGAGATGGGGAGAAAGTTGGAGGAGCTGAAGGAGTTTCCTCAGTACTTTGCCTTCAGTTTGGAGAACAGAATAAAGCCTAGGCATATGAAGGTTGTGCAAAGTGGGATTGCTTTAGCTTTGCCAGTGATGCTTAAGAGCACTGATGAGGAGTTTAGGGAGCTGGTGAAGCAGGGGAGTGTTTGA 909 0.4785 MPPAAGAVALHSSLCNISSDKPSSPLRSPPIHVSPKPKSLFQNHPLYTPTHTKLSLEFKEKILCLEVMGVDAGKALSQNPDLRTATMESIHCIITFLLSKGLQEKDLPRLFGMCPKILTSDIKTDLNPVFDFILNELKVPGNNFRRVVNKCPRLLTSSVKDQLRPCLVYLRRLGFKDLGALAYQDSVLLVSNVENTLIPKLKFLETLGLSKDEVRSMVLRCPALLTFSIENNFQPKYEYFAGEMGRKLEELKEFPQYFAFSLENRIKPRHMKVVQSGIALALPVMLKSTDEEFRELVKQGSV* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1620 302 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Gso15g1620 302 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Gso15g1620 302 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Gso15g1620 302 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Gso15g1620 302 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Gso15g1620 302 Gene3D Transcription termination factor 3, mitochondrial 133 301 IPR038538 -
Gso15g1620 302 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 299 - -
Gso15g1620 302 Pfam mTERF 188 293 IPR003690 GO:0003690|GO:0006355
Gso15g1620 302 Pfam mTERF 65 176 IPR003690 GO:0003690|GO:0006355
Gso15g1620 302 PANTHER CGI-12 PROTEIN-RELATED 15 299 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1620 Gso-Chr15 23503056 23504221 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso15g1620 mTERF 5.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1620 K15032 - gmx:100801948 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1620 15 23503056 23504221 Gso9g0752 9 11847521 11848751 GST