Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1583 ATGGATCGAGAAAATGGCGACGGCGACATTGAAGGCGGTGGAGCCGACGACGGGGGTTTTCGATCTTCGATTGGTCGCAAGTACCGCCCTGTGTTGGCCAACGATCGCGCGGTGCTCGAAATGTCCTCCATTGATCAGGGATCTTCTTCTTCCGCTTCCGCATTTCCAGATCAAAATCCTAATCTCAGAAAAGTAAATACGAGTGTGAATGGGAGTTCGGATGCTAAAGAAGAGAACCTTTCTCATGAACAGAAACCTAATGGATCCCGGCAGCAGGAATCTAAACTGGAATTGTTCGGTTTTGATTCTCTTGTCAACATTCTTGGTCTGAAAAGTATGACTGGTGAGCATGTTACACAACCATCTAGTCCTAGAGATGGTGAGGATATTTCCATCACAGCTGGCTTGCCTAAGCCTGCTGCTCCCAAACTGGGTACGCTGATGGGTGTCTTTATTCCATGTATACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGTTGCTTGTTTCTTTATGTGGCGCTTGTACATTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCTTACTATCTCATAGGCCGTGCCCTTGGTCCTGAAGTTGGAGTTAGCATTGGTCTATGCTTTTTCCTGGGAAATGCTGTTGCCGGAGCACTTTATGTATTGGGAGCTGTAGAAACATTTTTGAAAGCAGTTCCTTCTGCTGGGATTTTTAGAGAGACTGTCACTCAAGTTAATGGTACTGCAATAGCACAACCTATAGAGAGTCCAAGTTCACATGACTTGCAAATATATGGGATTGTTTTGACTATTCTGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCACCTGCTTTTCTCATACCTGTTTTATTCTCAGTCGTCTGCATATTTTTGGGAATTTTTTTGGCAGGGAAGGATCATCCTTCAGAGGGAATTACTGGGTTGAGTTCAGAGACATTTAAAGAAAATTGGAGTGCAGATTATCAAAAGACTAACGATGCTGGAATTCCAGAAACTGATGGCTCGGTAACCTGGAATTTCAATTCATTGGTTGGCCTCTTTTTCCCTGCTGTGACGGGAATAATGGCAGGTTCTAATCGATCATCCTCTCTGAGAGATACTCAGCAATCAATTCCTGTTGGAACTTTAGCTGCAACTCTTACAACTACTTCTCTGTATCTTGTTTCTTTGATGTTATTTGGTGCCGTTGCCACCAGAGAGAAGCTTTTAACTGACAGGCTACTTACAGCTACAATTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGAATTATTCTTTCAACTATGGGTGCTGCTCTTCAGAGCCTGACTGGTGCCCCACGTCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTATTTTGAACTACTTTAAAGTTGGAGATGGCGGTGAACCACATGTTGCTACCTTTTTTACTGCTTTCTTATGTATTGGGTGTGTCGTTATTGGGAATCTGGATCTTATCACTCCAACTGTAACTATGTTTTTTCTTCTATGTTACACTGGTGTCAACTTATCCTGCTTCCTTCTCGATCTTCTAGATGCCCCTAGTTGGCGTCCTCGGTGGAAATTTCACCATTGGAGTCTGTCCCTTGTGGGAGCATTACTTTGCATAGTGATCATGTTCCTAATCTCTTGGTCATTCACCGTGGTGTCTTTGCTCCTTGCAAGCCTCATATATAAGTACGTGAGCATTAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCATATTTCCAACTAGCACTTCGTAGCCTTCGGTCCCTAGGAGCAAGCCAAGTGCACCCGAAGAATTGGTATCCAATTCCACTGGTATTTTGCCGACCCTGGGGCAAACTGCCAGAAAATGTTCCCTGTCATCCCAAACTTGCAGATTTTGCTAACTGTATGAAGAAGAAAGGTCGGGGAATGTCCATATTTGTCTCTATACTAGATGGGGATTACCATGAATGTGCTGAAGATGCCAAGACTGCTTGCAAACAACTTAGCACCTACATCGATTACAAAAATTGTGAAGGTGTGGCTGAGATTGTTGTTGCCCCTAACATGTCTGAAGGCTTCCGTGGCATTATTCAGACAATGGGCCTTGGCAATCTCAAGCCGAACATTGTGGTGATGCGTTACCCAGAAATTTGGCGGAGGGAAAACTTGATAGAAATCCCTGCCACCTTTGTTGGGATAATTAATGATTGCATTGTTGCAAACAAGGCTGTGGTTATTGTTAAGGGTCTTGATGAATGGCCAAATGAGTACCAGAGGCAGTATGGCACAATTGATTTGTATTGGATTGTGAGAGATGGTGGTCTCATGCTGCTTCTCTCTCAGCTCCTTCTTACCAAGGAGAGCTTTGAGAATTGCAAGATTCAGGTCTTTTGTATTGCAGAAGAGGATGCAGACGCAGAGGGGCTGAAAGCTGATGTGAAAAAATTCCTTTACGATCTTCGGATGCAAGCAGAAGTCTTTGTCATAACGATGAAATGGGATGCACAGATGGATGGTGGTGGGTCTCCTGCACAAGATGAGTCAATGGATGCATTTACTAGTGCTCAGCAAAGAATTGATGATTACTTAACCCAAATGAAGGCGATGGCGAAGAGAGAAGGTACTCCTCTAATGGCAGATGGCAAGCCCGTGGTTGTGAACGAGAAGCAGGTCGAGAAGTTTCTTTACACGACACTTAAGCTCAATTCGACCATTTTGAGATATTCAAGAATGGCTGCTGTTGTGTTGGTGAGTCTACCTCCACCTCCAGTGAGCCACCCAGCATATTTCTATATGGAGTACATGGATCTGTTGCTGGAGAAAATACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGACGTTGTAACCCTATTCACATAG 2979 0.4374 MDRENGDGDIEGGGADDGGFRSSIGRKYRPVLANDRAVLEMSSIDQGSSSSASAFPDQNPNLRKVNTSVNGSSDAKEENLSHEQKPNGSRQQESKLELFGFDSLVNILGLKSMTGEHVTQPSSPRDGEDISITAGLPKPAAPKLGTLMGVFIPCIQSILGIIYYIRFSWIVGMAGIGETLLLVSLCGACTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETVTQVNGTAIAQPIESPSSHDLQIYGIVLTILLCFIVFGGVKMINRVAPAFLIPVLFSVVCIFLGIFLAGKDHPSEGITGLSSETFKENWSADYQKTNDAGIPETDGSVTWNFNSLVGLFFPAVTGIMAGSNRSSSLRDTQQSIPVGTLAATLTTTSLYLVSLMLFGAVATREKLLTDRLLTATIAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVGDGGEPHVATFFTAFLCIGCVVIGNLDLITPTVTMFFLLCYTGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLVGALLCIVIMFLISWSFTVVSLLLASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKTACKQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLIEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFENCKIQVFCIAEEDADAEGLKADVKKFLYDLRMQAEVFVITMKWDAQMDGGGSPAQDESMDAFTSAQQRIDDYLTQMKAMAKREGTPLMADGKPVVVNEKQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPVSHPAYFYMEYMDLLLEKIPRILIVRGYRRDVVTLFT* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1583 992 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 19 991 IPR004842 GO:0006811|GO:0015377|GO:0016021
Gso15g1583 992 MobiDBLite consensus disorder prediction 43 93 - -
Gso15g1583 992 Gene3D Amino acid/polyamine transporter I 142 607 - -
Gso15g1583 992 MobiDBLite consensus disorder prediction 1 26 - -
Gso15g1583 992 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 19 991 - -
Gso15g1583 992 TIGRFAM 2a30: K-Cl cotransporter 82 992 IPR004842 GO:0006811|GO:0015377|GO:0016021
Gso15g1583 992 MobiDBLite consensus disorder prediction 43 75 - -
Gso15g1583 992 Pfam Solute carrier family 12 791 991 IPR018491 GO:0006811|GO:0016020|GO:0022857
Gso15g1583 992 Pfam Solute carrier family 12 659 780 IPR018491 GO:0006811|GO:0016020|GO:0022857
Gso15g1583 992 Pfam Amino acid permease 149 625 IPR004841 GO:0016020|GO:0055085
Gso15g1583 992 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1583 Gso-Chr15 21958045 21977098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1583 144 992 Inorganic Solute Cotransporters AT1G30450 83.196 0.0 1455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1583 K14427 - gmx:100795205 1896.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1583 15 21958045 21977098 Gso9g0711 9 10295315 10328542 GST