Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso15g1569 | ATGGGAAGCCAACTTGTGTGTAATGGGTGTAGGAACATCTTGGTTTACCCTAGAGGAGCAACCAATGTTTGCTGTGCATTGTGCAACACCGTTACCTCTGTTCCTCCTCCTGGAATGGACATGTCACAACTTTATTGTGGAGGCTGTACGACATTGCTAATGTACACACGTGGTGCTACAAGTGTGAGATGTTCCTGCTGTCACACTATTAACCTTGTACCAGTACTAGAATCTAATCAAGTCATTCATTGTACGAACTGCCGGACAACACTCATGTATCCTTATGGAGCTTCCTCAGTAAAATGTGCAATTTGTCGCTATATTACTAATGTCAGTATGACGAATGGAAGGCTTCCAATTCCTGTACAGAGACCAAATGGAACAGCCAACTCTGGAACAGTATCTTCTACTTCATCGCTGCAGTCAATGCCTCATTCTCAGAGCCAAACTGTCGTAGTAGAAAATCCCATGTCTGTTGATTCGAGTGGGAAATTGGTGAGCAATGTTGTTGTGGGCGTTACAACAGAGAAGAAATGA | 537 | 0.4358 | MGSQLVCNGCRNILVYPRGATNVCCALCNTVTSVPPPGMDMSQLYCGGCTTLLMYTRGATSVRCSCCHTINLVPVLESNQVIHCTNCRTTLMYPYGASSVKCAICRYITNVSMTNGRLPIPVQRPNGTANSGTVSSTSSLQSMPHSQSQTVVVENPMSVDSSGKLVSNVVVGVTTEKK* | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso15g1569 | 178 | Pfam | LSD1 zinc finger | 7 | 31 | IPR005735 | - | |
Gso15g1569 | 178 | Pfam | LSD1 zinc finger | 84 | 108 | IPR005735 | - | |
Gso15g1569 | 178 | Pfam | LSD1 zinc finger | 46 | 70 | IPR005735 | - | |
Gso15g1569 | 178 | PANTHER | PROTEIN LSD1 | 1 | 178 | IPR040319 | - | |
Gso15g1569 | 178 | MobiDBLite | consensus disorder prediction | 121 | 146 | - | - | |
Gso15g1569 | 178 | TIGRFAM | LSD1: zinc finger domain, LSD1 subclass | 82 | 110 | IPR005735 | - | |
Gso15g1569 | 178 | TIGRFAM | LSD1: zinc finger domain, LSD1 subclass | 4 | 34 | IPR005735 | - | |
Gso15g1569 | 178 | TIGRFAM | LSD1: zinc finger domain, LSD1 subclass | 43 | 73 | IPR005735 | - | |
Gso15g1569 | 178 | PANTHER | PROTEIN LSD1 | 1 | 178 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso15g1569 | Gso-Chr15 | 21605645 | 21611246 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-LSD | Gso15g1569 | zf-LSD1 | 1.7e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso15g1569 | - | - | gmx:100792570 | 344.354 |