Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1564 ATGGAGCAGTTGAAATTGGCGGCAGATTCTGAAGCCAAAGAGGATAAGTCTTTGGGACACAAGCCAAAAAATAACAATGCCCTTGAGTCTTCTGACAGTCTGAGAAATAAAAAGATATCAGCTCGATGGGATCCGGTTGAAGCATGTCGGCCTATAATTGAAGAAGCACCTGTTTTTTATCCGACTATTGAAGAATTTGAAGACACGCTTAGTTACATAGGAAAGATACGACCCCTAGCTGAACCCCATGGCATATGTAGGATCGTTCCTCCAGCTTGCTGGGCTCCACCCTGTCCTCTTAAGGAGAAAGATCTATGGGAAAATACTGAATTTCCCACTCGTATTCAACAAATTGATTTGCTTCAAAATAGGGAACCTATGAGGAAAAAAAGTAGGGGAAGGAAGCGAAAACGTAGAAAGCACTCCAAAACAGGCACATGTAGGAGGAAGCCTGCCAATGCAGCTTCTGAAGCTAAGAATGCTTCTGAGTCTGAAGAGAAATTCGGATTTCAATCAGGGTCAGACTTCACGCTTAAAGACTTTCAGCAATATGCTAATTTTTTTAAGGAATGCTACTTTGGGTTGAGAGATGCTAATGGAGACAGAATAGTGAGTGAAAGTGACCATCAAAAGAGATGGGAGCCCTCTGAGGAGGAAATTGAAGGTGAATACTGGCGAATAATTGAGCAACCAACTGATGAGGTGTATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCCAAGGCCGCATCATTAACTAAGAGTGAGTCAGATCAATATGCCCAGTCTGGCTGGAATCTGAATAATTTTGCCCGACTGCCAGGTTCTGTACTAAGTTATGAAGGAAGTGATATATCAGGAGTTCTAGTGCCATGGCTGTATGTTGGCATGTGTTTTTCATCATTTTGCTGGCATGTTGAGGACCATCACCTCTATTCACTAAACTATTTGCACTGGGGTGACCCAAAAGTATGGTATGGAGTACCTGGAAGCCATGCTGCAGCCTTGGAAAAAGTAATGAGGAAGCACTTGCCTGATTTATTTGAGGAACAACCAAATCTACTCAATGATCTGGTTACCCAGTTTTCTCCTTCAATTCTTAAATCTGAGGGAGTGCCTGTGTATCGCACAGTTCAGCATTCTGGGGAATTTGTTATTACCTTTCCCAGGGCATATCATGCTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCAGTGAATGTGGCTCCTATTGATTGGTTAATGCATGGACAAAATGCTGTCGAGCTTTACAGGTTACAATGCCGTAAGACATCCTTGTCACATGACAAGCTGTTATTTGGGTCAGCACTGGAAGCTGTACGAGCCCTTGCAGAGCTAGCTCTTGGAAAGGAAACTCCAAAAAGTTTGAAATGGGGAAGTGTTTGTGGGAAAGATGGAGATCTTACCAAGGCAGTTAAGGCAAGGATAAAGATGGAAGAAGAAAGGCTAGACTGTCTTCCAAATCATCTTAAGTTGCTGAAGATGAACAGTGATTTTGATTTGTACAAGGAAAGAGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCAGCTATGGGTTGTGAGTGCTCCCCTGACAGATATTCTTGTCTTAAGCATGCTAATTTGTTCTGCTTGTGTGGATTGGAGAAAAGATTTGTTCTGCTTCGATATACTATAAGTGAACTAAATAAATTGCTTGAAGCATTAGAAGGAGAATCACATGCTATTGAGGTGTGGGCAAATAAAAACTTTGGAATGATTTCTGCCAATGCCAATGAGGTTTGCTTAGATAAACCAGACCTTGAGAAAGACATGTACAAAATCAAGAATTGTGAAGAAATGGAAAGCTCAACTGGCTTTGCAGGAACCAAGGATAGGTCAAATTTAAATGCACCTAGCAGTCCTAATAGTCATATTACTTCAGAGATAGTGCAGTCTGAGGCTCACCCTGTAACTTCAAGTGCAGCATATGAAAGTATAGATAGTCATAATGATAATAATAATGATAAAAAGTTGATCACAGACAACAAAGATAAAGTGGATCAGGCTGGTTCTCTGGATTTGAATCTTGATGTTATCTCTGGTGAAAATGAAAATCATTTGCTGCATATTGCTGGTAAGCATCATAGTAAAGGTGTTTTAGTAGAGGAAAAAGTGTGCTGTTCAGAAACCAAACAGGAAGAAGACAACATGGAACTTTGTGGTGAGGGTAACTTATCAAACTCGTTTTCTGTTCTAAAGACAGATTTTTCATCATGTTCAAGGGGTGTTCGTAATTATTGTACATTTGATGGTGGAAAAATTGAGATGGATCTGCAAATGGATTCTGATTCTGGAAATCAGCACAACAATCTATTTGAAAGGAAAGCCATAGACACCACACATACTAGTATATCTTTGACAGACGAAAGCTGCTTAGTGCAAATGTTTGGTACTTCTGTAAAGCTTGTAAGTTTGGGATCTGCTGTTTATGGAAAGCTCTGGTGCAGTAAGCACACACTATACCCAAAAGGATTCAAGACTCGAGTTAATTTCTTTAGCATTCTTGATCCAACAAGAATCTGTACCTATATTTCTGAAGTCATTGATGCTGGTTTTCTTGGACCTCTTTTCAAGGTTACCATGGAAGAATGTCCAAGTGAGGCTTTCACAGATACCTCAGCAGATAATTGCTGGGAATCAGTTCTGAAGAGATTACATCATGAAATCATGAGGCAAAGGAGTCTAGGTGAACTAGAACTTCCTCTCTTAGAGCTCCTGAAAAGCATTAATGGTCATAGAATGTTTGGCTTCCTTTTACCATCTATTATTCAGGCCATCGAAGCTCAAGATCCCAGCCATCTGTGTGTAGAGTACTGGAATCACAAAGTTGCCCCTTCTGGCAGTGTTGTTGATAACTTCACATATGGTTCCAGTGGTATTATTATCAATACCAAAAATTTTGGTATTGATTTGATTAAGCAGGAAAAAGAGGACATCCTTGAAGAGATGAAATTAATACTGCAAAGGGCAAGTCCTGATGAGTTAAGCACAATGCATAAGTTACTCAGCTCTGATGCACAGTGCTGTGAGTGGAGAGTGGCATTGATAGCGCTGATGGATGAGATCCGAAACGCTCGTCAATAA 3141 0.4069 MEQLKLAADSEAKEDKSLGHKPKNNNALESSDSLRNKKISARWDPVEACRPIIEEAPVFYPTIEEFEDTLSYIGKIRPLAEPHGICRIVPPACWAPPCPLKEKDLWENTEFPTRIQQIDLLQNREPMRKKSRGRKRKRRKHSKTGTCRRKPANAASEAKNASESEEKFGFQSGSDFTLKDFQQYANFFKECYFGLRDANGDRIVSESDHQKRWEPSEEEIEGEYWRIIEQPTDEVYYGADLETGALGSGFPKAASLTKSESDQYAQSGWNLNNFARLPGSVLSYEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHAAALEKVMRKHLPDLFEEQPNLLNDLVTQFSPSILKSEGVPVYRTVQHSGEFVITFPRAYHAGFNCGFNCAEAVNVAPIDWLMHGQNAVELYRLQCRKTSLSHDKLLFGSALEAVRALAELALGKETPKSLKWGSVCGKDGDLTKAVKARIKMEEERLDCLPNHLKLLKMNSDFDLYKERECFSCFYDLHLSAMGCECSPDRYSCLKHANLFCLCGLEKRFVLLRYTISELNKLLEALEGESHAIEVWANKNFGMISANANEVCLDKPDLEKDMYKIKNCEEMESSTGFAGTKDRSNLNAPSSPNSHITSEIVQSEAHPVTSSAAYESIDSHNDNNNDKKLITDNKDKVDQAGSLDLNLDVISGENENHLLHIAGKHHSKGVLVEEKVCCSETKQEEDNMELCGEGNLSNSFSVLKTDFSSCSRGVRNYCTFDGGKIEMDLQMDSDSGNQHNNLFERKAIDTTHTSISLTDESCLVQMFGTSVKLVSLGSAVYGKLWCSKHTLYPKGFKTRVNFFSILDPTRICTYISEVIDAGFLGPLFKVTMEECPSEAFTDTSADNCWESVLKRLHHEIMRQRSLGELELPLLELLKSINGHRMFGFLLPSIIQAIEAQDPSHLCVEYWNHKVAPSGSVVDNFTYGSSGIIINTKNFGIDLIKQEKEDILEEMKLILQRASPDELSTMHKLLSSDAQCCEWRVALIALMDEIRNARQ* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1564 1046 Pfam C5HC2 zinc finger 518 570 IPR004198 -
Gso15g1564 1046 MobiDBLite consensus disorder prediction 128 147 - -
Gso15g1564 1046 ProSiteProfiles FYR domain FYRN motif profile. 811 869 IPR003888 GO:0005634
Gso15g1564 1046 ProSiteProfiles FYR domain FYRC motif profile. 871 961 IPR003889 GO:0005634
Gso15g1564 1046 SMART fyrc_3 875 967 IPR003889 GO:0005634
Gso15g1564 1046 Pfam F/Y-rich N-terminus 818 866 IPR003888 GO:0005634
Gso15g1564 1046 MobiDBLite consensus disorder prediction 623 658 - -
Gso15g1564 1046 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 1044 - -
Gso15g1564 1046 Coils Coil 988 1008 - -
Gso15g1564 1046 Pfam F/Y rich C-terminus 873 961 IPR003889 GO:0005634
Gso15g1564 1046 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Gso15g1564 1046 SMART cupin_9 263 429 IPR003347 -
Gso15g1564 1046 SUPERFAMILY Clavaminate synthase-like 211 449 - -
Gso15g1564 1046 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 1044 - -
Gso15g1564 1046 MobiDBLite consensus disorder prediction 121 166 - -
Gso15g1564 1046 SMART JmjN_1 55 96 IPR003349 -
Gso15g1564 1046 ProSiteProfiles JmjC domain profile. 266 429 IPR003347 -
Gso15g1564 1046 MobiDBLite consensus disorder prediction 1 22 - -
Gso15g1564 1046 Gene3D Cupin 41 413 - -
Gso15g1564 1046 Pfam jmjN domain 57 90 IPR003349 -
Gso15g1564 1046 Gene3D - 814 955 - -
Gso15g1564 1046 MobiDBLite consensus disorder prediction 1 34 - -
Gso15g1564 1046 Pfam JmjC domain, hydroxylase 296 412 IPR003347 -
Gso15g1564 1046 SMART fyrn_3 825 869 IPR003888 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1564 Gso-Chr15 21507036 21515662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1564 815 991 JUMONJI Transcription Factor Family AT1G30810 51.124 8.60e-51 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gso15g1564 JmjC 2.4e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1564 - - gmx:100801775 2097.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1564 15 21507036 21515662 Gso9g0694 9 9826032 9835876 GST