Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1552 ATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACATTTGTTTTTGGATTGAAAGTGTGGGTACTAATGGGAATAATAGTTGGGTTATTCATCATAATCATTCTTGTGGTGCTATCAATATGTCTCACTTTAAGAAAGAAGTTCAGAAGAGTCAATGGCAAGCTTCCACTTAGCCATGTGATATCTGTTTCAGATGAGATCAAAGAAATCAAAGTCGATCAAGTTCCAGCAAATAATCATCCACAAAATGGTGTCTTTACGAGTCTGAATGACAAATTTGGTGACAGGGAGTCTGAAAAGGTTTTGAACCAAACAAAGAATGGGGATAATAGTAGTCAATCAGGTTCATCTAATCATTTAGAGAAAGATGCCAATGGCTCTCAATCAGGTGAAGACAGCGGTGTTAAGAGTGTTTCTGCTTACAGATCTTCTTCGCATCCTATAACCGCACCATCCCCTTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGTTGGGGCCACTGGTTTACATTAAGGGACCTGGAACTTGCTACAAACAGGTTTGCAAAAGATAACGTTATTGGTGAAGGTGGGTATGGAATTGTTTATCACGGTCAATTAATCAATGGGAATCCTGTGGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAGGAATTCAGGGTAGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTGGGATATTGCATTGAAGGCACTCACAGGCTGTTGGTTTATGAGTATGTTAACAATGGCAATTTGGAGCAGTGGCTTCATGGAGCCATGCGACAACATGGCTTTCTTACTTGGGATGCACGGATAAAAATTCTCCTTGGAACAGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAACCAAAAGTTGTGCATCGAGATATTAAGTCGAGCAATATTCTGATTGATGAGGACTTTAATGCCAAAATATCAGACTTTGGGTTGGCTAAGTTACTTGGTGCTGGAAAAAGCCACATTACAACCAGAGTTATGGGTACTTTTGGATATGTTGCTCCAGAATATGCCAATTCTGGCTTGCTAAACGAGAAGAGTGATGTTTATAGCTTTGGGGTATTGCTCCTTGAAGCAATTACAGGAAGAGACCCTGTGGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTGGGGTGTCGACGCTCAGAAGAGGTGTTGGATCCTAACATTGAGACTAGGCCATCGACAAGTGCCCTTAAGCGTGCCCTCTTGACTGCTTTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTTCGTATGCTTGAATCAGAGGAATATCCTATACTGCGAGAGGATCGAAGACGCCGAAGGAGTCAGGCAGGAAACATGGAAGTGGAGACTCAGAGGGAGAATTCTGATACTGATAAGAGCGACAATCCAGATTATAAGCCCAGTGGCAGAAGGAACCAACGCATGTAG 1515 0.4277 MASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILVVLSICLTLRKKFRRVNGKLPLSHVISVSDEIKEIKVDQVPANNHPQNGVFTSLNDKFGDRESEKVLNQTKNGDNSSQSGSSNHLEKDANGSQSGEDSGVKSVSAYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFAKDNVIGEGGYGIVYHGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGCRRSEEVLDPNIETRPSTSALKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPILREDRRRRRSQAGNMEVETQRENSDTDKSDNPDYKPSGRRNQRM* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1552 504 MobiDBLite consensus disorder prediction 105 152 - -
Gso15g1552 504 SUPERFAMILY Protein kinase-like (PK-like) 166 462 IPR011009 -
Gso15g1552 504 MobiDBLite consensus disorder prediction 100 154 - -
Gso15g1552 504 SMART serkin_6 182 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1552 504 Gene3D Transferase(Phosphotransferase) domain 1 258 470 - -
Gso15g1552 504 ProSiteProfiles Protein kinase domain profile. 182 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1552 504 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Gso15g1552 504 MobiDBLite consensus disorder prediction 460 504 - -
Gso15g1552 504 PANTHER OS01G0323000 PROTEIN 2 504 - -
Gso15g1552 504 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1552 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Gso15g1552 504 CDD STKc_IRAK 188 454 - -
Gso15g1552 504 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Gso15g1552 504 PANTHER RECEPTOR-LIKE KINASE PLANT 2 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1552 Gso-Chr15 20734896 20740277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1552 17 456 Trihelix Transcription Factor Family AT1G70460 40.225 1.76e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso15g1552 Pkinase 7.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1552 - - gmx:732653 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1552 15 20734896 20740277 Gso9g0683 9 9470838 9476212 GST
Gso7g1976 7 43728506 43733432 Gso15g1552 15 20734896 20740277 PCT
Gso17g0329 17 2969418 2974370 Gso15g1552 15 20734896 20740277 PCT
Gso15g1552 15 20734896 20740277 Gso7g1976 7 43728506 43733432 PCT
Gso15g1552 15 20734896 20740277 Gso17g0329 17 2969418 2974370 PCT