Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1544 ATGGTGATTTTAAACCTTGGGAGAAATGAGGGGCAGGGAATGCGGCTTGGGAAATACGAGTTGGGAAAGACACTTGGAGAAGGCAATTTTGGAAAAGTCAAGTTGGCAAGGGACACTCATTCTGGCAAACTTTTTGCTGTTAAGATCCTTGACAAGAGCAAGATCATTGACCTCAATAACACTGATCAGATAAAGAGGGAAATATTCACCTTGAAGCTGCTGAAGCATCCGAACGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTATGTGAATGGAGGAGAGTTATTTGACAAAATTGCATCCAAAGGTAAACTAAAAGAAGCTGTAGGTAGGAAGATATTCCAACAGTTGATTGATTGTGTAAGCTTCTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGCTGGAGAATGTACTTGTGGATGCCAAAGGGAACATAAAGATAACCGATTTTAACCTTAGTGCTTTACCCCAGCATTTTAGGGCAGATGGGTTGCTACATACAACATGTGGAAGTCCCAACTATGTTGCCCCTGAGATTCTTGCCAATAAAGGCTATGATGGTGCAACATCAGATATATGGTCATGTGGTGTTATCTTGTATGTAATTCTAACAGGATACCTTCCTTTTGATGACAGAAATCTCGCAGTTCTCTATCAAAAGATTCTTAAAGGAGAAGTTCAGATACCAAGATGGCTATCACCTGGTTCTCAAAACATTATAAAGAGAATGCTTGATGTCAATCTTAAAACCCGGATAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAGGGTTATAGTCCTGCAAATCCAGAAGATGAGGAAGAGAGTGTGTATATTGATGAAGACTTTTCCATCCATGATGTGTCACTTGAAGCAGATCAAGGGAGTCCAAGATCACCAACACTAATCAATGCATTTCAGTTGATATCAATGTCTTCAAGTCTAGACCTCTCTGGTCTTTTTGAGCAAGAGGATGTTTCTGAGAGGAAAATAAGATTTACATCCATCCATTCACCAAAAGATTTAGTTGAGAGGCTTGAAGACATTGTAACTGAAATGGGATTCAGAGTCCAGAAGAAAAATGGGATGTTGAAAGTGGTGCAAGAGATCAAAACACAGAAATGTCTTGGTAACCTCTCAGTGGCAGCAGAGGTGTTTGAAATAAGTCCATCCCTATATGTAGTAGAGTTAAGTAAGTCATGTGGAGATGCTTCTGTATATAGACAGCTATGCAAGAAGCTATCTAATGATTTGGGTGTTCACAAAAAGGAATAG 1314 0.395 MVILNLGRNEGQGMRLGKYELGKTLGEGNFGKVKLARDTHSGKLFAVKILDKSKIIDLNNTDQIKREIFTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIASKGKLKEAVGRKIFQQLIDCVSFCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHFRADGLLHTTCGSPNYVAPEILANKGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKILKGEVQIPRWLSPGSQNIIKRMLDVNLKTRITMAMIKEDEWFKEGYSPANPEDEEESVYIDEDFSIHDVSLEADQGSPRSPTLINAFQLISMSSSLDLSGLFEQEDVSERKIRFTSIHSPKDLVERLEDIVTEMGFRVQKKNGMLKVVQEIKTQKCLGNLSVAAEVFEISPSLYVVELSKSCGDASVYRQLCKKLSNDLGVHKKE* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1544 437 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1544 437 SUPERFAMILY Protein kinase-like (PK-like) 16 327 IPR011009 -
Gso15g1544 437 Gene3D Phosphorylase Kinase; domain 1 9 98 - -
Gso15g1544 437 Pfam NAF domain 313 372 IPR004041 GO:0007165
Gso15g1544 437 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Gso15g1544 437 CDD CIPK_C 317 428 - -
Gso15g1544 437 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Gso15g1544 437 Gene3D Kinase associated domain 1, KA1 311 434 - -
Gso15g1544 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Gso15g1544 437 Pfam Haspin like kinase domain 88 166 - -
Gso15g1544 437 Gene3D Transferase(Phosphotransferase) domain 1 99 280 - -
Gso15g1544 437 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1544 437 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1544 437 PANTHER CBL-INTERACTING PROTEIN KINASE 21 12 436 - -
Gso15g1544 437 PANTHER - 12 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1544 Gso-Chr15 19566545 19575698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1544 82 437 CBL-interacting serine-threonine protein kinases AT3G17510 68.436 2.22e-168 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso15g1544 Pkinase 7.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1544 K07198 - gmx:100780524 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0886 13 23148070 23153439 Gso15g1544 15 19566545 19575698 PCT
Gso17g0333 17 3007269 3012505 Gso15g1544 15 19566545 19575698 PCT
Gso15g1544 15 19566545 19575698 Gso13g0886 13 23148070 23153439 PCT
Gso15g1544 15 19566545 19575698 Gso17g0333 17 3007269 3012505 PCT