Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1539 ATGGCTGAGTTTGTCATCGAAACTTTGTTAGGGAATTTGAACTCACTTGTTCAAAAGGAGTTGCAACCATTTCTTGGTTTTGATCAAGACTTGGAAAGGCTTTCCGGCTTGTTAACTACAATCAAGGCTACACTTGAAGATGCTGAGGAGAAACAATTCTCAAACAAAGATATAAAAGATTGGTTGGGAAAGCTAAAACATGCAGCTCACAACCTGGATGACATCATTGATGAGTGTGCCTATGAAGTAATGAGGTTGGAGTACGAAGGGGTCAAGTGTGGTCCATTAAACAAGCTACAATGCTATTGCTTATCCTCTTTTCATCCCAAGCGTGTTGTTTTTCATTACAAAATTTCTAAGAAAATGAAAAGAATAAGTGAGAGATTAAGGGAAATTGATGAGGAAAGGACTAAGTTTCCTTTAATTGAGATGGTTCATGAGAGAAGAAGACGAGTCCTTGAGTGGCGCCAAACTGTCTCTCGAGTCACTGAACCAAAAGTCTATGGAAGAGAAGAAGATAAGGATAAAATTTTAGACTTTTTGATTGGTGATGCTTCTCATTTTGAGTATTTATCTGTCTATCCAATAACTGGTCTAGGTGGACTTGGAAAAACAACACTTGCCCAATTCATCTTCAATCATAAGAGGGTAATCAACCACTTTGAGTTAAGAATTTGGGTATGTGTTTCAGAAGATTTCAGTTTGGAGAGAATGATGAAAGCTATCATTGAAGCAGCATCTGGGCATGCTTGCACGGATTTGGATCTAGGGTCACAACAAAGAAGAATTCATGATATGCTTCAAAGAAAAAGATATTTGCTTGTTTTAGATGACGTGTGGGATGATAAGCAAGAGAATTGGGAGAGGTTGAAATCTGTATTGTCTTGTGGGGCCAAGGGTGCTTCCATTTTAGTCACTACTCGTCAATCAAAGGTAGCAACAATCTTGGGAACAGTATGTCCTCATGAATTACCAATTCTACCTGACAAATATTGTTGGGAATTGTTTAAACAACAAGCCTTTGGACCAAATGAGGAAGCACAAGTAGAGCTTGCAGACATAGGGAAGGAGATAGTAAAGAAGTGTCAGGGAGTACCTCTTGCTGCAAAAGCACTAGGAGGTCTTTTACGCTTCAAAAGAAACAAAAATGAGTGGCTCAATGTTAAGGATAGCAAACTTTTGGAGTTACCACACAATGAAAACTCCATAATTCCTGTCCTGAGATTAAGTTACTTGAACTTACCAATTGAGCACAGACAATGTTTTTCTTATTGTGCAATATTTCCCAAAGATGAAAGAATAGGAAAGCAATATTTAATAGAACTTTGGATGGCTAATGGATTCATTTCATCTAATGAAAAATTAGATGTTGAAGATGTTGGTGATGATGTATGGAATGAATTATATTGGAGATCATTTTTTCAGGATATTGAGACAGATGAATTTGGCAAAGTTACAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCAGAATCTATTACAGAAGATGTTTGCTGCATTACAGAAGAAAATCGTGTAACTACTTTGCATGAAAGAATACTCCATCTATCAGATCATAGGTCCATGCGAAATGTAGATGAGGAATCCACTAGTTCAGCGCAGTTGCATCTAGTCAAATCTTTGAGGACCTATATATTGCCAGATCTCTATGGTGACCAACTTTCGCCTCATGCTGATGTGTTGAAATGTAATTCTTTGCGGGTACTTGATTTTGTAAAAAGAGAAACATTGTCATCTTCTATAGGTCTTTTAAAACATCTAAGGTACTTGAATCTCTCTGGGAGTGGTTTTGAAATTCTTCCAGAATCACTATGTAAATTGTGGAATTTGCAAATATTGAAATTAGATCGTTGCATTCATCTCAAAATGTTGCCTAACAATTTGATATGCTTAAAAGATCTAAAGCAATTGTCTTTTAATGATTGCCCAAAACTATCAAACTTGCCTCCTCATATAGGTATGCTGACTTCCCTAAAGATTTTAACCAAGTTCATTGTTGGCAAAGAAAAAGGATTCAGTTTGGAAGAACTGGGACCATTGAAGCTTAAAAGAGATCTTGACATCAAGCATCTAGGAAATGTAAAAAGTGTAATGGATGCCAAAGAAGCCAATATGTCAAGTAAGCAGTTGAATAAGTTGTGGTTATCATGGGAAAGAAATGAAGACTCTGAATTGCAAGAAAATGTTGAGGGGATTCTTGAAGTGCTTCAACCTGATACCCAACAACTTCGGAAATTAGAGGTGGAAGGATATAAAGGTGCCCGTTTCCCACAATGGATGTCTAGTCCTTCTCTCAAACATTTATCAATTTTAATACTTATGAATTGCGAAAACTGTGTACAACTTCCACCATTAGGGAAATTGCCTTCTCTAAAGATTCTAAGAGCATCACACATGAATAATGTAGAATACCTCTATGATGAGGAATCCAGCAATGGGGAAGTAGTTTTCAGGGCCCTAGAAGATCTGACCTTCCGTGGTCTGCCAAAGTTTAAAAGGTTATCAAGGGAGGAGGGCAAAATCATGTTCCCAAGCCTTTCCATACTTGAAATTGATGAATGTCCTCAATTTTTGGGAGAAGAAGTACTGCTAAAAGGGTTGGACTCTCTCTCAGTATTCAATTGTAGTAAGTTCAACGTGTCGGCAGGTTTTTCTCGCCTTTGGAAATTGTGGCTTTCCAATTGCAGAGATGTGGGAGATTTGCAAGCTTTACAAGATATGACGTCCCTCAAGGTCTTAAGATTAAAGAATCTACCGAAGCTAGAATCATTGCCTGACTGCTTTGGAAACCTTCCCTTGCTTTGTGATTTGAGTATTTTTTACTGTTCCAAGTTGACTTGTCTTCCATTGAGCCTGAGACTTACCAATTTGCAACAATTGACTATTTTTGGTTGTCATCCGAAGTTAGAAAAGCGTTGTGAGAAAGAAACAGGAGACGACTGGCTAAACATAGCTCACATTCCCCATATATCTGTGGGCTATAAACATTATGATCATATTTCCGATTAA 3033 0.3755 MAEFVIETLLGNLNSLVQKELQPFLGFDQDLERLSGLLTTIKATLEDAEEKQFSNKDIKDWLGKLKHAAHNLDDIIDECAYEVMRLEYEGVKCGPLNKLQCYCLSSFHPKRVVFHYKISKKMKRISERLREIDEERTKFPLIEMVHERRRRVLEWRQTVSRVTEPKVYGREEDKDKILDFLIGDASHFEYLSVYPITGLGGLGKTTLAQFIFNHKRVINHFELRIWVCVSEDFSLERMMKAIIEAASGHACTDLDLGSQQRRIHDMLQRKRYLLVLDDVWDDKQENWERLKSVLSCGAKGASILVTTRQSKVATILGTVCPHELPILPDKYCWELFKQQAFGPNEEAQVELADIGKEIVKKCQGVPLAAKALGGLLRFKRNKNEWLNVKDSKLLELPHNENSIIPVLRLSYLNLPIEHRQCFSYCAIFPKDERIGKQYLIELWMANGFISSNEKLDVEDVGDDVWNELYWRSFFQDIETDEFGKVTSFKMHDLVHDLAESITEDVCCITEENRVTTLHERILHLSDHRSMRNVDEESTSSAQLHLVKSLRTYILPDLYGDQLSPHADVLKCNSLRVLDFVKRETLSSSIGLLKHLRYLNLSGSGFEILPESLCKLWNLQILKLDRCIHLKMLPNNLICLKDLKQLSFNDCPKLSNLPPHIGMLTSLKILTKFIVGKEKGFSLEELGPLKLKRDLDIKHLGNVKSVMDAKEANMSSKQLNKLWLSWERNEDSELQENVEGILEVLQPDTQQLRKLEVEGYKGARFPQWMSSPSLKHLSILILMNCENCVQLPPLGKLPSLKILRASHMNNVEYLYDEESSNGEVVFRALEDLTFRGLPKFKRLSREEGKIMFPSLSILEIDECPQFLGEEVLLKGLDSLSVFNCSKFNVSAGFSRLWKLWLSNCRDVGDLQALQDMTSLKVLRLKNLPKLESLPDCFGNLPLLCDLSIFYCSKLTCLPLSLRLTNLQQLTIFGCHPKLEKRCEKETGDDWLNIAHIPHISVGYKHYDHISD* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1539 1010 Pfam NB-ARC domain 171 411 IPR002182 GO:0043531
Gso15g1539 1010 PRINTS Disease resistance protein signature 193 208 - -
Gso15g1539 1010 PRINTS Disease resistance protein signature 266 280 - -
Gso15g1539 1010 PRINTS Disease resistance protein signature 362 376 - -
Gso15g1539 1010 PRINTS Disease resistance protein signature 913 929 - -
Gso15g1539 1010 Pfam Rx N-terminal domain 5 87 IPR041118 -
Gso15g1539 1010 Gene3D - 5 132 - -
Gso15g1539 1010 Gene3D - 150 319 IPR027417 -
Gso15g1539 1010 SUPERFAMILY L domain-like 474 993 - -
Gso15g1539 1010 Gene3D Ribonuclease Inhibitor 889 1003 IPR032675 -
Gso15g1539 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 425 IPR027417 -
Gso15g1539 1010 PANTHER DISEASE RESISTANCE PROTEIN RP 22 880 IPR044974 GO:0006952
Gso15g1539 1010 PANTHER OS10G0130600 PROTEIN 22 880 - -
Gso15g1539 1010 Coils Coil 31 51 - -
Gso15g1539 1010 CDD RX-CC_like 2 132 IPR038005 -
Gso15g1539 1010 Gene3D - 327 410 IPR042197 -
Gso15g1539 1010 Gene3D Ribonuclease Inhibitor 531 888 IPR032675 -
Gso15g1539 1010 Gene3D - 411 500 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1539 Gso-Chr15 19376744 19379776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1539 196 521 WRKY Transcription Factor Family AT5G45050 23.907 3.20e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1539 - - gmx:100785160 1590.86