Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1525 ATGGAACTTTCCTCAAAGAAAGAGTTACTATCTCGAATAGTATCAACACTAACGCCCACCATCACACTCATCTTCTTCTTCCTTGTGCTTTCTCCGAGCCTGTGCACATCACTCGGAAGCACCAACACAGTTGGATCGGAGTTGCTGAAGGTTGCTCCTTCTGAATTTGAGGGGACAGTGAGAACCGTCGTTGATGTGTTGCAAGAAGTCACCTCTATTCTCTCCGAGTTCGGTTCTGGCTTCGGCGATTCACGTCTTTCTAACGCCGTTTCTGACTGTCTTGATTTGCTTGACATGTCCTCTGATGAACTCGATTGGTCTGTCTCCGCCACACAGAGTCCCAAAGGGAAGCACAACAGCACAGGGAACACAAGTTCGGATTTGAGAACATGGCTGAGCGCAGCACTTGCAAATCAAGATACATGCATTGACGGATTCGACGGCACGAACGGCATGGTGAAGGGTCTAGTATCCACTGGTATAGGCCAAGTGATGTCCTTACTCCAACAACTTCTCACACAGGTGAAACCAGTTTCGGACCACTTCTCTTTCTCTTCCCCTCAGGGCCAATACCCTTCATGGGTTAAAACAGGGGAAAGAAAGCTCCTTCAGGCAAATGTGGTTAGTTTTGACGCTGTGGTGGCGGCCGACGGGACGGGAAACTACACCAAGGTGATGGACGCGGTGCTGGCTGCGCCTAATTACAGCATGCAAAGGTATGTAATACATATAAAGAGAGGGGTTTACTATGAGAACGTTGAGATCAAGAAGAAGAAGTGGAACCTCATGATGGTTGGAGATGGCATGGATGCCACTATAATTTCTGGTAACAGAAGTTTCATTGATGGTTGGACCACGTTCCGGTCAGCTACTTTTGCTGTGAGTGGCAGAGGATTCATAGCACGAGACATTACCTTCCAGAACACGGCAGGACCAGAGAAGCACCAAGCAGTGGCACTGAGATCAGACTCAGACCTCTCTGTGTTCTTCCGATGTGGGATCTTTGGTTACCAAGACAGCCTCTACACTCACACCATGCGCCAATTCTACAGAGAGTGCAAAATCAGTGGCACAGTGGACTTCTTCGGTGATGCCACAGCAATTTTCCAAAACTGCCACATCTCAGCCAAAAAAGGGTTACCAAATCAAAAGAACACAATCACAGCACATGGTAGAAAAAACCCAGATGAACCAACCGGTTTCTCAATCCAATTTTGCAACATTTCTGCTGATTACGACCTTGTGAACTCGGTTAATAGCTTTAACTCCACCCACACGTACCTTGGTAGGCCTTGGAAACCCTATTCTAGGACAATATTCATGCAATCTTACATTAGTGATGTGTTGAGGCCAGAAGGGTGGTTGGAGTGGAATGGTGATTTTGCTTTGGACACTTTGTACTATGCTGAGTACATGAATTATGGGCCTGGTGCTGGAGTGGCTAATAGGGTTAAATGGCAAGGGTACCATGTGATGAATGATTCTAGTCAGGCTAGTAATTTCACGGTGTCACAGTTTATTGAGGGGAATCTTTGGTTGCCTTCAACGGGTGTAACGTTCACGGCTGGATTGGGGGTAGTATGA 1584 0.471 MELSSKKELLSRIVSTLTPTITLIFFFLVLSPSLCTSLGSTNTVGSELLKVAPSEFEGTVRTVVDVLQEVTSILSEFGSGFGDSRLSNAVSDCLDLLDMSSDELDWSVSATQSPKGKHNSTGNTSSDLRTWLSAALANQDTCIDGFDGTNGMVKGLVSTGIGQVMSLLQQLLTQVKPVSDHFSFSSPQGQYPSWVKTGERKLLQANVVSFDAVVAADGTGNYTKVMDAVLAAPNYSMQRYVIHIKRGVYYENVEIKKKKWNLMMVGDGMDATIISGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFFRCGIFGYQDSLYTHTMRQFYRECKISGTVDFFGDATAIFQNCHISAKKGLPNQKNTITAHGRKNPDEPTGFSIQFCNISADYDLVNSVNSFNSTHTYLGRPWKPYSRTIFMQSYISDVLRPEGWLEWNGDFALDTLYYAEYMNYGPGAGVANRVKWQGYHVMNDSSQASNFTVSQFIEGNLWLPSTGVTFTAGLGVV* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1525 527 PANTHER PECTINESTERASE 50 524 - -
Gso15g1525 527 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 50 524 - -
Gso15g1525 527 SUPERFAMILY Pectin lyase-like 208 523 IPR011050 -
Gso15g1525 527 Pfam Pectinesterase 211 510 IPR000070 GO:0030599|GO:0042545
Gso15g1525 527 Gene3D - 209 526 IPR012334 -
Gso15g1525 527 CDD PMEI-like_4 20 179 - -
Gso15g1525 527 SMART PMEI_2 5 178 IPR006501 GO:0004857
Gso15g1525 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 168 IPR035513 -
Gso15g1525 527 Pfam Plant invertase/pectin methylesterase inhibitor 32 158 IPR006501 GO:0004857
Gso15g1525 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1525 Gso-Chr15 18436643 18442008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1525 24 524 Carbohydrate Esterase AT3G43270 64.093 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1525 K01051 - gmx:100777500 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1525 15 18436643 18442008 Gso9g0647 9 8327664 8332375 GST