Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1523 ATGGCTCATTCATCACATAAACTCTTTTTCCTTCTGCTTTCAATCTTCTTCTCACACACCTGTGCTGTAAACTCTTCCAATGCTTCCACAACACTTCATACCAATCTCTCTTCCTTAAAATCTTTCTGCACAACCACTCCATACCCAGAAGTTTGTTCCAATTCATTGAAGCTATCCATCTCAATAAACATAAGTCCAAACATAATCAACTACCTCCTTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTCTCAAATCTCTTCCACAACGTTGGACACTCAAACATCATAGAGAAGCAAAGAGGAGCTGTTCAAGACTGCAGGGAACTCCACCAATCCACATTAGCTTCTTTGAAAAGATCACTATCAGGGATCCGTTCCTCCAACTCCAAGAACATAGTTGATGCAAGAGCTTACCTCAGTGCAGCACTCACCAACAAGAACACATGTCTAGAAGGACTAGATTCTGCTTCTGGAATAATGAAGCCATCTCTGGTGAAATCTGTGATCGACACTTACAAGCATGTCAGTAACTCTCTTTCAATGCTCCCTAAGCCAGAGATGGGGGCACCCAATGCGAAAAAGAATAACAAGCCTTTGATGAATGCTCCAAAGTGGGCATCAAGCAGTGACCAAAGGCTCTTTGAAGACTCAGATGGGGAAAATTATGACCCAAATGAAATGCTTGTTGTGGCTGCAGATGGAACTGGGAACTTTAGCACCATCACTGAAGCCATCAACTTTGCTCCGAATAACAGCATGGATAGGATAGTCATCTATGTCAAAGAAGGGATTTACGAGGAAAATATAGAAATCCCAAGCTATAAGACCAACATTATGATGCTTGGCGATGGAAGTGATGTGACTTTCATAACTGGTAACAGAAGCGTCGGTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCTGTCTTTGGTGATGGTTTTCTGGCACGTGATATTGCGATTGAAAACAGCGCAGGGCCAGAGAAGCATCAAGCAGTGGCCTTGAGGGTAAATGCAGACCTAACAGCTTTCTACAGGTGTGCAATTTATGGCTACCAAGACACTCTATATGTCCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGTACCATTGATTACATATTTGGAAATGCAGCAGTGATTCTACAAGAATGTAACATCATATCAAGAAAACCAATGCCTGGTCAATTCACAGTAATCACTGCACAATCTAGAGATAGCCCAGATGAGGACACTGGTATCTCATTCCAAAATTGCTCAATCATAGCAACTCTTGATCTCTATTCCAACTCTAGCAGCTTCAAGAGCTACCTTGGGAGGCCATGGAGGGTGTATTCTCGCACTGTTTACCTTGAGTCCTACATTGATGACTTCATTGACGCAAAGGGTTGGACAAAGTGGTCTAATGAGCAAGGATTGAACACTTTGTATTACGGAGAGTATGACAACTATGGACCTGGTTCCGGCACAGAGAAGCGTGTGCAATGGTTTGGGTACCATTTGATGGATTATGGTGATGCCTATAATTTCACAGTTTCGCAGTTCATCAATGGAGATGGTTGGCTTGATACTACGTCCGTTCCTTATGATGATGGGATTTGA 1623 0.4264 MAHSSHKLFFLLLSIFFSHTCAVNSSNASTTLHTNLSSLKSFCTTTPYPEVCSNSLKLSISINISPNIINYLLQSLQVAISETTKLSNLFHNVGHSNIIEKQRGAVQDCRELHQSTLASLKRSLSGIRSSNSKNIVDARAYLSAALTNKNTCLEGLDSASGIMKPSLVKSVIDTYKHVSNSLSMLPKPEMGAPNAKKNNKPLMNAPKWASSSDQRLFEDSDGENYDPNEMLVVAADGTGNFSTITEAINFAPNNSMDRIVIYVKEGIYEENIEIPSYKTNIMMLGDGSDVTFITGNRSVGDGWTTFRSATLAVFGDGFLARDIAIENSAGPEKHQAVALRVNADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDYIFGNAAVILQECNIISRKPMPGQFTVITAQSRDSPDEDTGISFQNCSIIATLDLYSNSSSFKSYLGRPWRVYSRTVYLESYIDDFIDAKGWTKWSNEQGLNTLYYGEYDNYGPGSGTEKRVQWFGYHLMDYGDAYNFTVSQFINGDGWLDTTSVPYDDGI* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1523 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
Gso15g1523 540 SUPERFAMILY Pectin lyase-like 228 537 IPR011050 -
Gso15g1523 540 SMART PMEI_2 34 184 IPR006501 GO:0004857
Gso15g1523 540 Gene3D - 226 540 IPR012334 -
Gso15g1523 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 185 IPR035513 -
Gso15g1523 540 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Gso15g1523 540 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 185 IPR006501 GO:0004857
Gso15g1523 540 PANTHER PECTINESTERASE 7 539 - -
Gso15g1523 540 PANTHER PECTINESTERASE 7 539 - -
Gso15g1523 540 MobiDBLite consensus disorder prediction 186 223 - -
Gso15g1523 540 CDD PMEI-like_3 41 184 - -
Gso15g1523 540 Pfam Pectinesterase 231 526 IPR000070 GO:0030599|GO:0042545
Gso15g1523 540 ProSitePatterns Pectinesterase signature 2. 374 383 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1523 Gso-Chr15 18379968 18382392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1523 20 540 Carbohydrate Esterase AT2G26440 65.977 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1523 - - gmx:100776969 1059.28