Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1522 ATGAATAGAGCTTATTCTTATCATAAACTCTTCTTCCTTCTGTTTGCTATCTTCTTCTCACATACTTGTATCAACTCTTCTAATACTTCTACAACAGTTCAAGTCGATCTCTCTTCCATAAGATCTTTCTGCATAACCACCCCATACCCAGAAGTTTGTTTCAATTCACTGAATGTGTCCATCCCAATAGACACAAATCCAAACTCAAACAGCTACTTCCTTCAGTCCCTCCAAGTAGCAATATATGAAACCACTAAGCTGTTAAATCTCTTCAACAATGTTAGACCCTCAAACATCAAAGAGAAGCAAAAAGGAGCAATTCAAGATTGCAGGGAACTCCACCAATCCACATTGGCTTCTCTAAAAAGATCACTATCGGGGATCAGTTCCTTCAAAATAACCCTAATTGATGCAAGAATATACCTCAGTGCAGCCCTGTCCAACAAGAACACATGCCTAGAAGGCCTAGATTCTGCTTCTGGTACCATGAAGCCAGTTCTGGTGAAATCTGTGGTCAACACTTACAAACATGTAAGTAATTCTCTTTCAATTCTCTCAAACCCTGAGATGGGGTCTCCTGAAAACCAGTCTTTGGTGGGTGATTCAAAGTGGCTATCTAGCACTGACCTAGGGTTCTTTCAAGACTCAGATGGGGATGGATATGACCCAAATGAAGTGATTGTTGTGGCTGTAGATGGAACTGGGAAATTTAGCACCATCACAGAAGCCATCGACTTTGCTCCAAATAACAGCAGGGATAGAACAGTGATCCGTGTCAAAGAAGGGATTTACAAGGAAAATGTGGTAATCCAAAGCTATAAGATCAACATTGTGATGCTTGGCGATGGAAGTGATGTCACTGTCATAACTGGTAACAGAAGCGTAGGTGATGGATGCACCACTTTCAATTCTGCAACTCTAGCGGTTTCTGGTGAAGGATTTCTGGCACGTGATATAGCTTTTAACAACAGCGCAGGGCTAGAGAAGCAGCAAGCAGTGGCCTTGAGGGTAAATGCAGACTTAACTGCTTTTTACAGATGTGCAATTCATGGTTACCAAGACACTTTATTCGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTTCATATTTGGAAATGCAGCAGTGGTTCTACAAGGATGTAACATTGTATCCAAAAAACCACTGCCTGGCCAATACACTGTTATCACTGCACAATCCAGAGATAGCCCAAATGAGAACACTGGCATCTCAATCCAATACTACTCAATCAAAGCTAACTTTGATGACTCTAGTGTGAAGAGCTACCTTGGGAGGCCATGGAGGATATATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGACAAAGTGGTCTAATGAGCAAGGATTGGACACCTTGTATTACGGAGAGTTTGACAATTATGGACTCGGTTCCAGCACTGATAACCGTGTACAATGGTCTGGGTACCATGCAATGGATCATGATGATGCCTTTAATTTCACAGTTTTAGAGTTCATTAATGATGGACATGATTGGCTTGAATCTACTTTGTTTCCTTTTGTTGAAGGGATTTGTGTTTGGAACGTTGCATTCACGTTCCACGTTTTTTTTATATTTTATTATTTTGGAAAATTTAGTTATTTCTGA 1674 0.4068 MNRAYSYHKLFFLLFAIFFSHTCINSSNTSTTVQVDLSSIRSFCITTPYPEVCFNSLNVSIPIDTNPNSNSYFLQSLQVAIYETTKLLNLFNNVRPSNIKEKQKGAIQDCRELHQSTLASLKRSLSGISSFKITLIDARIYLSAALSNKNTCLEGLDSASGTMKPVLVKSVVNTYKHVSNSLSILSNPEMGSPENQSLVGDSKWLSSTDLGFFQDSDGDGYDPNEVIVVAVDGTGKFSTITEAIDFAPNNSRDRTVIRVKEGIYKENVVIQSYKINIVMLGDGSDVTVITGNRSVGDGCTTFNSATLAVSGEGFLARDIAFNNSAGLEKQQAVALRVNADLTAFYRCAIHGYQDTLFVHSFRQFYRECDIYGTIDFIFGNAAVVLQGCNIVSKKPLPGQYTVITAQSRDSPNENTGISIQYYSIKANFDDSSVKSYLGRPWRIYSRTVYLESYIDDFIDPKGWTKWSNEQGLDTLYYGEFDNYGLGSSTDNRVQWSGYHAMDHDDAFNFTVLEFINDGHDWLESTLFPFVEGICVWNVAFTFHVFFIFYYFGKFSYF* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1522 557 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 186 IPR006501 GO:0004857
Gso15g1522 557 Pfam Plant invertase/pectin methylesterase inhibitor 39 184 IPR006501 GO:0004857
Gso15g1522 557 PANTHER PECTINESTERASE 9 532 - -
Gso15g1522 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 187 IPR035513 -
Gso15g1522 557 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Gso15g1522 557 Gene3D - 222 533 IPR012334 -
Gso15g1522 557 SUPERFAMILY Pectin lyase-like 223 532 IPR011050 -
Gso15g1522 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 186 IPR035513 -
Gso15g1522 557 ProSitePatterns Pectinesterase signature 1. 251 270 IPR018040 -
Gso15g1522 557 Pfam Pectinesterase 227 516 IPR000070 GO:0030599|GO:0042545
Gso15g1522 557 PANTHER PECTINESTERASE 9 532 - -
Gso15g1522 557 SMART PMEI_2 35 184 IPR006501 GO:0004857
Gso15g1522 557 CDD PMEI-like_3 42 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1522 Gso-Chr15 18342335 18345203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1522 38 533 Carbohydrate Esterase AT2G26440 61.284 0.0 599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1522 15 18342335 18345203 Gso9g0644 9 8187268 8189654 GST