LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g1502	ATGGATAGCGATGGAGGCTCCAAATTGACTGGGATTAGGCAGATTGTGAAGATAAAGGAAATGCTCCAGAAGTGGCAAAGTGTGACATTAGGCCCAAAACCTTGCAATTCCCTTTCTGATCATGTGGCTAATGATGATGGAAGCATATCACCATTGATCAACAAAAGGGTAGTGAATGTGATATCGGACAACGAAGACAGTTGCCAAAGTCCTGCAGAACCGCTTCCGCCAGCTGATGTTCCAAAAGGGTACTTGGCAGTGTATGTTGGACCTGAGCTTAGGAGGTTCATCATTCCCACCAGCTACCTTAGCCACTCTCTCTTCATAGTTTTGCTGGAAAAGGCTGCAGAGGAATTCGGGTTTGATCAGAGTGGTGGCCTCACCATCCCATGTGAGATTGAGACCTTCAAGTACCTGCTCAAGTGCATGGAGAATGAGCAGAAAGAGCAACTCGGTGACAGTGCCCGTAAGTTATTTGCATTAATCTGGAAGCTCAAGGACTGTGGAAGAGTAAGTAGCTATTCCCATATTTCTGCACGTGCAAAATCATAG	552	0.4601	MDSDGGSKLTGIRQIVKIKEMLQKWQSVTLGPKPCNSLSDHVANDDGSISPLINKRVVNVISDNEDSCQSPAEPLPPADVPKGYLAVYVGPELRRFIIPTSYLSHSLFIVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLKCMENEQKEQLGDSARKLFALIWKLKDCGRVSSYSHISARAKS*	184

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso15g1502	183	PANTHER	SMALL AUXIN-UP RNA-RELATED	7	159	-	-
	Gso15g1502	183	Pfam	Auxin responsive protein	75	142	IPR003676	GO:0009733
	Gso15g1502	183	PANTHER	AUXIN-INDUCED PROTEIN-LIKE-RELATED	7	159	IPR003676	GO:0009733

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g1502	Gso-Chr15	17916713	17921151	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso15g1502	1	149	Calmodulin-binding Proteins	AT5G20810	67.097	3.40e-66	199

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso15g1502	K14488		-	gmx:100819193	370.548

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso15g1502	15	17916713	17921151	Gso9g0622	9	7615576	7618591	GST
	Gso13g0834	13	22640458	22642462	Gso15g1502	15	17916713	17921151	PCT
	Gso17g0380	17	3473654	3475741	Gso15g1502	15	17916713	17921151	PCT
	Gso15g1502	15	17916713	17921151	Gso13g0834	13	22640458	22642462	PCT
	Gso15g1502	15	17916713	17921151	Gso17g0380	17	3473654	3475741	PCT