Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1496 ATGCAACTCCAACCCACTCTCTCCACTCTCTACCTCTCCCTTTTGTTAACAATAACGTTAACATCTCCAACCTTGGCAGCACAAAGCAAGCCGCAGGATCTGGTCCGGTCCTCGTGCGTGCACGCGCGGTACCCGCGTCTGTGCCTGCGCACCCTCTCGAACTACCCGGGTCCCGCCAACACGCCGTTAGACGTGGCCAGGGCAGCTTTGAGGGTAAGCCTGGCCCACACGCGCCGGGCCTCCAAATTCCTCCATGCACTTTCTCATGGAGGCGCTGCCGCCATGAGCAAGCGCCAGCGCTCCGCGCTGCGCGACTGTAATGAACAGATTTCGGACTCCGTCGACCAGCTGCGGCGGAGCCTCGACGAGCTGCAGCACCTGCGCTCCGAGACGTTCAAGTGGCAGATGAGCAACGCCCTGACTTGGGTCAGCGCCGCCCTCACCAACGGCGACACCTGCCTCGACGGCTTCGGAGGGAATGCCAGGCCCGACGTCAAACGGAGAGTCACGGATGTGGCGAGGGTTACTAGCAATGCTTTGTATATGATTAATCGGCTCGGGCAAAGTAGAACCGGGAAGCCCAAGCCCAAACCCAAACCCAGGTCCAGGCCTCAGCCTCGCTCTGCCTCAAGTACTGAAAAATTGAATTAG 651 0.5991 MQLQPTLSTLYLSLLLTITLTSPTLAAQSKPQDLVRSSCVHARYPRLCLRTLSNYPGPANTPLDVARAALRVSLAHTRRASKFLHALSHGGAAAMSKRQRSALRDCNEQISDSVDQLRRSLDELQHLRSETFKWQMSNALTWVSAALTNGDTCLDGFGGNARPDVKRRVTDVARVTSNALYMINRLGQSRTGKPKPKPKPRSRPQPRSASSTEKLN* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1496 216 MobiDBLite consensus disorder prediction 185 216 - -
Gso15g1496 216 CDD PMEI-like_3 37 186 - -
Gso15g1496 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 191 - -
Gso15g1496 216 PANTHER PECTINESTERASE INHIBITOR 3 9 191 - -
Gso15g1496 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 186 IPR035513 -
Gso15g1496 216 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 186 IPR006501 GO:0004857
Gso15g1496 216 Pfam Plant invertase/pectin methylesterase inhibitor 33 181 IPR006501 GO:0004857
Gso15g1496 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 187 IPR035513 -
Gso15g1496 216 Coils Coil 107 127 - -
Gso15g1496 216 SMART PMEI_2 30 182 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1496 Gso-Chr15 17711489 17712643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1496 30 194 Carbohydrate Esterase AT5G53370 31.395 4.47e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1496 - - gmx:100816686 377.481