Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1494 ATGGAACTGAAATTTGTTCTCTTTCTGCTCCTTCTGCTTGCTGTTGCTGGTTATGGACTCGCTTCCAATGCGACACTGAACGAGACTTGTGGATACTTCGATGGTTCTCTCAATAGGGACCCTAAAGTGCCTTGTCCAATTGGTTGGATTATGGACCCTAACAAGACCAAGTGCTTTCTCCATGTTGGGAGGCCTCAATCTTGGAATGACTCAGAGACCTGTTGTAGTAAGTATGGTGGACATTTAGTGTCATTGACATCGCTTCCGGAGCTACAATTTGCCCAGGGCCTATGCGGTGAATCTATAAATAGTTGCTGGGTTGGTGGGCAAAGAGTCAACGCTACAGCTGGTAATCAGTGGATGTGGTCTGACAATTCACCTTGGAACAACTCCATATTTTCTATGGTTGAGGTTCCACCCCATTGTAATGGAACTGGACCATCCTGTCATAGGAACAGCACAGACAATTTGTGTACAGTAGTCACTAATAATTCAAACTCTCTCACGACTGAGAGATGCAACAATCCTCATGCTTCTCTATGTATACTTGATATAGATACAAAATGTAACCAAATGCACCGCCGCAGGGAATACTTTATCATCCTCACAGTGGTGAGTGCCTTGATACTCTCCACTACATTAGCAGTGGTAGTTTGGCTTCTTGTATATAAGCGAGGCAAGAAAAGAAGGCGGTCTAGAAAACTATCTATACCAGGAGCTTCTCTTCCATCATGGAAAGTTTTTACCAAAGAGGAATTAAGGTCAATTACAAAGAATTTCAGTGAAGGTAACCGTCTTGTTGGTGATACCAAGACTGGTGGTACATACAGTGGGGTTGTATCAGATGGTTCGAAGGTTGCAGTTAAGAGATTAAAGAGGTCAAACTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATTGGCAGGGTCGCTAGGCTTCGTCATCCTAATCTAGTGGCTGTGATGGGATGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGGCCCTTAGATAAATGGTTACATCATATACCAAGGGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCAACAACACTTGCTCAAGGAATTGCGTTTCTCCATGACAAGGTTAAGCCACAAGTTGTGCATCGAGATATACGCACTAGCAATGTACTGCTGGATGAGGAATTTGGAGCACGCCTTATGGGGGTTGGTCTGTCCAAGTTCGTGCCATATGAGGTAATGCATGAGAGGACTGTGATGGCAGGTGGAACTTATGGATATCTTGCTCCGGAGTTTGTGTACAGAAACGAGCTCACAACAAAGAGTGACGTATATAGTTTCGGTGTGCTACTACTTGAAATAGTAAGTGGACGTAGACCTGCACAGGCAGTGGATTCTGTGGGTTGGCAGAGTATATTTGAATGGGCGACACCTCTTGTGCAAGCTCATCGCTATCATGAACTCTTGGATCTTCATATAACTTCCTCCTCTTCTAGTATCATCCCAGAGGCTAGTACCATCCAAAAGGTGGTTGACCTCGTTTATTCTTGCACGCAGCATGTCCCGTCTATGCGCCCTAGAATGTCTCATGTCTTTCACCAGCTGCAACAGATTACCCAGCCACATGCAAAGTAA 1644 0.444 MELKFVLFLLLLLAVAGYGLASNATLNETCGYFDGSLNRDPKVPCPIGWIMDPNKTKCFLHVGRPQSWNDSETCCSKYGGHLVSLTSLPELQFAQGLCGESINSCWVGGQRVNATAGNQWMWSDNSPWNNSIFSMVEVPPHCNGTGPSCHRNSTDNLCTVVTNNSNSLTTERCNNPHASLCILDIDTKCNQMHRRREYFIILTVVSALILSTTLAVVVWLLVYKRGKKRRRSRKLSIPGASLPSWKVFTKEELRSITKNFSEGNRLVGDTKTGGTYSGVVSDGSKVAVKRLKRSNFQRKKEFYSEIGRVARLRHPNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRTSNVLLDEEFGARLMGVGLSKFVPYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYHELLDLHITSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVFHQLQQITQPHAK* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1494 547 CDD CLECT 57 181 - -
Gso15g1494 547 ProSiteProfiles C-type lectin domain profile. 54 182 IPR001304 -
Gso15g1494 547 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 543 - -
Gso15g1494 547 SUPERFAMILY Protein kinase-like (PK-like) 234 539 IPR011009 -
Gso15g1494 547 Gene3D - 37 185 IPR016186 -
Gso15g1494 547 SUPERFAMILY C-type lectin-like 40 182 IPR016187 -
Gso15g1494 547 Pfam Lectin C-type domain 65 181 IPR001304 -
Gso15g1494 547 PANTHER - 7 543 - -
Gso15g1494 547 ProSitePatterns Tyrosine protein kinases specific active-site signature. 383 395 IPR008266 GO:0004672|GO:0006468
Gso15g1494 547 Gene3D Transferase(Phosphotransferase) domain 1 337 547 - -
Gso15g1494 547 Gene3D Phosphorylase Kinase; domain 1 239 336 - -
Gso15g1494 547 SMART tyrkin_6 270 538 IPR020635 GO:0004713|GO:0006468
Gso15g1494 547 SMART CLECT_2 45 182 IPR001304 -
Gso15g1494 547 ProSiteProfiles Protein kinase domain profile. 261 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1494 547 Pfam Protein tyrosine and serine/threonine kinase 273 538 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1494 Gso-Chr15 17614038 17619625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1494 75 544 Receptor kinase-like Gene Family AT1G52310 69.729 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Gso15g1494 PK_Tyr_Ser-Thr 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1494 - - gmx:100794353 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1494 15 17614038 17619625 Gso9g0612 9 7429293 7434962 GST