Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1487 ATGTCGAGCTCATCGGAGTACTCTGAATTTTCCGGCCAGAAACCGGCGAGGTCGCCGGAGAAATCGAGCTTCTCTCAGACTTGCAGTCTGTTGAGTCAATACATCAAGGAGAAGGGTAGCTTCGGAGATCTTACCCTCGGAATGACATCATGTGGGTCACCTGAGACATCTTGTCAATCTGCTACAACCATGAACTTGTTTCCTCCCAAGGAAAACAACGTGGCACCAAAGAACCTGACAGCTATGGATTTGCTCTCTCCACAAGCTTCCTCCTATGGACCTTCAGAGGAGATTCCAACCTTGGTTAATTCCAGCGCAATTAAGTCTGTGAGCAAGGGTGCTAAAACTGCACAGATGACAATCTTTTATGGTGGGCAAGTTGTTGTGTTTGATGATTTTCCTGCTGACAAAGCAAGTGAGATCATGTCCTATGCCACCAAAGGGGGGATCCCCCAAAGCCAGAACAATTCTGTCTACACCTACACACAGAGCCAGCCTTCATTTCCTCCTACTTTGATCAGAACTTCTGCTGATTCAAGTGCTCCAATTATTCCCAGTGTGAACATTACAAACTCCATTCGTGAGCACCCTCAAGCATCATCCAGACCTGTTGTTTATCTGCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTTCGAAAGCACCATATCAAGTAGCAAATGGGCCTTCTAACAAGGCAGCTGAGTCCATGCCATGGCTTGGGCTGAGTGCTTCTTCACCTCAAATCTGA 777 0.4685 MSSSSEYSEFSGQKPARSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTSCGSPETSCQSATTMNLFPPKENNVAPKNLTAMDLLSPQASSYGPSEEIPTLVNSSAIKSVSKGAKTAQMTIFYGGQVVVFDDFPADKASEIMSYATKGGIPQSQNNSVYTYTQSQPSFPPTLIRTSADSSAPIIPSVNITNSIREHPQASSRPVVYLPIARKASLHRFLEKRKDRIASKAPYQVANGPSNKAAESMPWLGLSASSPQI* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1487 258 ProSiteProfiles Tify domain profile. 112 147 IPR010399 -
Gso15g1487 258 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 252 IPR040390 -
Gso15g1487 258 Pfam tify domain 115 145 IPR010399 -
Gso15g1487 258 MobiDBLite consensus disorder prediction 229 258 - -
Gso15g1487 258 Pfam Jas motif 208 233 IPR018467 -
Gso15g1487 258 PANTHER PROTEIN TIFY 10A 17 252 - -
Gso15g1487 258 MobiDBLite consensus disorder prediction 1 23 - -
Gso15g1487 258 SMART tify_2 112 147 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1487 Gso-Chr15 17346605 17349223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1487 1 253 Tify Gene Family AT1G19180 43.866 1.39e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso15g1487 tify 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1487 K13464 - gmx:100812618 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1487 15 17346605 17349223 Gso9g0604 9 7245028 7247729 GST
Gso13g0818 13 22492284 22494651 Gso15g1487 15 17346605 17349223 PCT
Gso17g0394 17 3619996 3622297 Gso15g1487 15 17346605 17349223 PCT
Gso15g1487 15 17346605 17349223 Gso13g0818 13 22492284 22494651 PCT
Gso15g1487 15 17346605 17349223 Gso17g0394 17 3619996 3622297 PCT