Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1483 ATGGCTTTAGCACTTTCCTCCACTGCATTGTCAAGCCTTCCAAACAGAGAAATTCGTCAAAAGGGTTTCCCAGACAGAACACCCACATGCTTGAGTTTGACCAGAAGAACAGTTGCAAATGCTACAAAAGGGGTCTCAGCTGTCTGTGAGCCACTTCCTCCAGATAGGCCATTGTGGTTCCCTGGTAGCTCACCTCCTGAGTGGCTTGATGGAAGTCTTCCTGGTGATTTCGGTTTTGACCCTCTTGGATTAGGGTCTGATCCAGAGTTGCTAAAGTGGTTTGCTCAAGCAGAACTAATGCATGCAAGATGGGCAATGCTCGCGGTGTTCGGAATTCTCGTACCCGAATTGCTCGAAAAAATCGGTTACATCGAAAACTTCTCTTGGTACGATGCTGGTGCGCGAGAGTATTTCGTGGACCCAACAACATTGTTCGTTGTGCAAATGGGCCTGATGGGCTGGGTGGAAGGCCGAAGATGGGCCGACATGGTCAATCCGGGGAGCGTTGACATTGAGCCCAAAGTGCCACACATTACGAACCCGAAGCCCGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCAATGATGTGGGGGAGAGGGTCACCGGAGCCAGTGATGGTTTTGAGGACCAAGGAGATCAAGAATGGAAGACTTGCAATGTTGGCCTTTGTTGGGTTCTGGTTCCAAGCTATTTACACTGGGGAAGGACCCATTGAAAATTTGATGGCACACCTTGCTGATCCTGGTCACTGCAACATTTTCTCGGCTTTCACGCGTTAG 783 0.5006 MALALSSTALSSLPNREIRQKGFPDRTPTCLSLTRRTVANATKGVSAVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVFGILVPELLEKIGYIENFSWYDAGAREYFVDPTTLFVVQMGLMGWVEGRRWADMVNPGSVDIEPKVPHITNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFTR* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1483 260 SUPERFAMILY Chlorophyll a-b binding protein 55 258 - -
Gso15g1483 260 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 258 - -
Gso15g1483 260 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
Gso15g1483 260 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Gso15g1483 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1483 Gso-Chr15 17262013 17264652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1483 54 259 Chloroplast and Mitochondria Gene Families AT3G61470 68.447 2.15e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1483 K08908 - gmx:100812066 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1483 15 17262013 17264652 Gso9g0601 9 7180566 7183219 GST