Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1482 ATGGCCGCCGCTGTTCGAATCCACCACCACCTCTCATTCCTTTTCTTGTTCTTATTCTTCATCTCTTTCTCATGCGGGACTGAAACTGATTCCCTCCTCCACCTCAAGAAATCTCTCACTAACTCTGACCGCTCCCTCTCCTCGTGGATCCCAAACATCTCCCCATGCTCCGGCACGTGGCTCGGCGTGGTCTGCTTTGACAACACCATCACGGGCTTGCACCTCTCTGACCTTGGCCTCTCCGGCTCGATCGACGTCGATGCCCTCGTCGAGATCCGTAGCCTCCGCACCCTTAGCTTCATCAACAACTCCTTCTCAGGCCCCATTCCAAACTTCAACAAACTTGGCTCCATAAAGTCCCTTCTCCTCACCCAAAACCGCTTCTCCGGCACAATCCCCACCGACTTCTTCTCCACCTTAAACTCCCTCAAGAAACTTTGGCTCTCAGGCAACAACTTCTCTGGTGAAATCCCACAATCCCTAACACAACTCAAACTCTTGAAAGAACTCCACCTCGAATACAACTCGTTCTCAGGCCAGATACCAAACTTCAACCAAGATCTGAAGTCGCTGGATTTGTCCAACAACAAACTCCAAGGTGCAATTCCTGTAAGCTTGGCAAGGTTCGGCCCTAACTCTTTCGCAGGAAATGAAGGTCTCTGTGGTAAGCCCTTAGAGAAGACTTGTGGTGATGATGATGGGTCTTCTTTGTTTTCTCTTCTAAGTAATGTTAACGAGGAAAAATACGATACGAGTTGGGCGACGAAGGTGATTGTAATATTGGTTATAGCAGTGGTGGCGGCAATGATATTTCTGTTCGTGAAGAGGAGTCGGAGGGGGGATGGGGAGTTGAGGGTGGTGAGCAGGAGCAGGAGCAACAGCACAGAGGAGGTATTGATGGTGCAGGTACCTAGCATGAGGGGGGGCGTAGGAGATAAGAAGAAGGAAGGAAATAAAAGAGGGGATATTGTGATGGTGAATGAGGAGAGGGGCGTATTTGGGCTTCAGGATTTGATGAAGGCGTCAGCGGAGGTGCTAGGGAATGGGGGGTTGGGATCAATGTACAAGGCGATGATGGGGACAGGGTTGTGCGTGGTGGTGAAGAGGATGAGGGAGATGAATAAGATCGGGAAGGACGTGTTTGACGCTGAGATGAGGCAGTTCGGGAGGATACGACACCGGAATATCATCACGCCACTCGCTTACCATTACCGAAGGGAGGAGAAGCTCTTTATTACTGAGTACATGCCCAAGGGAAGCTTGTTGTATGTCTTGCATGGTGACAGAGGAACATCCCATTCTGAGTTAACTTGGCCTACACGTTTGAACATTGTTAAGGGAATTGCAAGAGGGTTGAAATTCCTTTACTCTGAATTTTCCACCTACGACCTGCCCCACGGGAACCTCAAGTCCAGCAACGTTCTTCTAACTGATGATTACGAGCCTCTCTTGAGTGACTACGCCTTTCAGCCACTGATCAACCCCAAGGTCTCCGTGCAGGCATTGTTCGCCTTCAAATCCCCAGATTTTGTTCAGAATCAGAAGGTTTCGCAGAAGACCGATGTTTACTGCCTCGGTGTCATCATTCTTGAGATCATCACAGGGAAGTTCCCTTCCCAGTATCACAGCAATGGCAAGGGTGGCACTGATGTTGTGCAATGGGCCTTCACCGCAATTTCTGAGGGAACAGAAGCAGAGTTGATCGATTCGGAGTTACCAAACGACGCGAATTCGCGCAAGAACATGCTGCATCTTCTACACATTGGGGCTTGTTGCGCTGAGAGCAACCCTGAACAAAGACTAAACATGAAGGAAGCTGTTAGAAGGATAGAGGAGGTACAGGTTTAA 1848 0.4957 MAAAVRIHHHLSFLFLFLFFISFSCGTETDSLLHLKKSLTNSDRSLSSWIPNISPCSGTWLGVVCFDNTITGLHLSDLGLSGSIDVDALVEIRSLRTLSFINNSFSGPIPNFNKLGSIKSLLLTQNRFSGTIPTDFFSTLNSLKKLWLSGNNFSGEIPQSLTQLKLLKELHLEYNSFSGQIPNFNQDLKSLDLSNNKLQGAIPVSLARFGPNSFAGNEGLCGKPLEKTCGDDDGSSLFSLLSNVNEEKYDTSWATKVIVILVIAVVAAMIFLFVKRSRRGDGELRVVSRSRSNSTEEVLMVQVPSMRGGVGDKKKEGNKRGDIVMVNEERGVFGLQDLMKASAEVLGNGGLGSMYKAMMGTGLCVVVKRMREMNKIGKDVFDAEMRQFGRIRHRNIITPLAYHYRREEKLFITEYMPKGSLLYVLHGDRGTSHSELTWPTRLNIVKGIARGLKFLYSEFSTYDLPHGNLKSSNVLLTDDYEPLLSDYAFQPLINPKVSVQALFAFKSPDFVQNQKVSQKTDVYCLGVIILEIITGKFPSQYHSNGKGGTDVVQWAFTAISEGTEAELIDSELPNDANSRKNMLHLLHIGACCAESNPEQRLNMKEAVRRIEEVQV* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1482 615 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Gso15g1482 615 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Gso15g1482 615 Gene3D Transferase(Phosphotransferase) domain 1 416 615 - -
Gso15g1482 615 PANTHER LRR RECEPTOR-LIKE KINASE 8 615 - -
Gso15g1482 615 ProSiteProfiles Protein kinase domain profile. 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1482 615 Gene3D Ribonuclease Inhibitor 25 185 IPR032675 -
Gso15g1482 615 Gene3D Ribonuclease Inhibitor 186 231 IPR032675 -
Gso15g1482 615 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Gso15g1482 615 Pfam Protein kinase domain 344 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1482 615 SUPERFAMILY L domain-like 28 209 - -
Gso15g1482 615 Pfam Leucine Rich Repeat 188 214 IPR001611 GO:0005515
Gso15g1482 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 615 - -
Gso15g1482 615 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Gso15g1482 615 SUPERFAMILY Protein kinase-like (PK-like) 344 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1482 Gso-Chr15 17247163 17250637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1482 11 613 Receptor kinase-like Gene Family AT3G42880 49.921 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso15g1482 Pkinase 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1482 - - gmx:100790660 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0816 13 22461750 22464963 Gso15g1482 15 17247163 17250637 PCT
Gso17g0396 17 3636794 3640210 Gso15g1482 15 17247163 17250637 PCT
Gso15g1482 15 17247163 17250637 Gso13g0816 13 22461750 22464963 PCT
Gso15g1482 15 17247163 17250637 Gso17g0396 17 3636794 3640210 PCT