Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1477 ATGTCACAAGGGACTCTGAGGATGTATTTAAACAAGAAAGAGCCGTACTCACTCTCAATGGAAACAATACTAAGGTTAGCTCTAGATATATCAAGGGGCATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTTAAGTCAAGTAATTTTCTTCTCGATGATGACATGAGGGTTAAGGTGGCAGATTTTGGTACATCTTTTCTTGAAACGCGATGCCAGAAAAGCAAAGGGAACTCTGGAACATATCATTGGATGGCACCGGAGATGGTTAAGGAAAAACCTTATACTCGCAAAGTTGACGTGTACAATTTTGGTATTGTGCTTTGGGAGCTCACAACTGCTCTACTTCCCTTCCAAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGGTAGCATGGCTATGCTTGAACTCTAAATGA 435 0.4253 MSQGTLRMYLNKKEPYSLSMETILRLALDISRGMEYLHSQGVIHRDLKSSNFLLDDDMRVKVADFGTSFLETRCQKSKGNSGTYHWMAPEMVKEKPYTRKVDVYNFGIVLWELTTALLPFQGMTPVQAAFAVAEKVAWLCLNSK* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1477 144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 42 54 IPR008271 GO:0004672|GO:0006468
Gso15g1477 144 SMART serkin_6 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1477 144 Pfam Protein tyrosine and serine/threonine kinase 1 133 IPR001245 GO:0004672|GO:0006468
Gso15g1477 144 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Gso15g1477 144 SUPERFAMILY Protein kinase-like (PK-like) 1 135 IPR011009 -
Gso15g1477 144 PANTHER BNAA09G10470D PROTEIN 1 135 - -
Gso15g1477 144 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1477 144 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1477 Gso-Chr15 17128928 17129362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1477 1 135 MAP Kinase Kinase Kinase AT1G62400 88.148 7.37e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso15g1477 PK_Tyr_Ser-Thr 1.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1477 - - gmx:100786937 294.278