Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1468 ATGCCTCCCATGTCAACGATTCCAATTCACAGACCTGAATTTCGTACCTTATTCTTCAATGGGTCTCCAAGCCCTTGCAAATGCCTCAGAATTACTGCCTCATGGACCATGACCATGGATTCGAAATTTTCTCCAACAACAAAGAATAGTAATGATAATAATTATAATCTGAAGAAGAAGGAAGAACTCTCTGTGCAGATTCCAACCCCACCCATTTCCAAAGTGGAAACTTTAAACTCCAATGATCTCCAATTTGATCGATTGCAGCCATCGGATCAAGAATTGGGTCGAGTAAAAAGGTTTGAGTTTGGGCAATTTGTCGCACGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCATGGTTAAGGGCAGAAAGTCACTGGGAGGATCGACCGTACGACAGATATGTTGATAACTACAAAAGGAAATTTGCCGAGCAGGAATTTAATGCATTAAAAAGACGGTGCAAGGTGCAAAATGGTGATAGTTGCGCATGCATCATCACGGTGAGGAAGGAGCAGAAAAATGCAAAGCACTCAGTATTAAAGAGTGTTGTAGGAACCCTTGATTTGAATATCCGATATTTGCTACAAGGGGAGACTTATCCCGGGGAACGTGTAAAGGCCCCTCTTTTTTGCAGCATCAACAGAACACCACCAAGCAGGTATGGCTACATTGCAAACTTATGCGTCATCAAATCAGTTAGGCGACAGGGAATTGCAAGCAACATGATGTCTTTTGCAATTGAAGCTGCAAAATCTAATGGTTTGACACAGGTGTATGTGCATGTGGACAGAAATAATAGGCCTGCACAGATATTATACCAAAAAATGGGCTTCGAGGCATCACAGAACGGGCAACTCAGACAACAGTCAAAACCCCTTCCAATTAAAGGCCATGTTAGCAGAGAAGGTTTTCGTCTGATCTGGGATTACTGGAAATATCTTCGTAGACATAGTTATGCAAAATGCCGCTACAAATTTAGATTCCGATCCTAA 1002 0.4222 MPPMSTIPIHRPEFRTLFFNGSPSPCKCLRITASWTMTMDSKFSPTTKNSNDNNYNLKKKEELSVQIPTPPISKVETLNSNDLQFDRLQPSDQELGRVKRFEFGQFVAREAVLDEEYWTAAWLRAESHWEDRPYDRYVDNYKRKFAEQEFNALKRRCKVQNGDSCACIITVRKEQKNAKHSVLKSVVGTLDLNIRYLLQGETYPGERVKAPLFCSINRTPPSRYGYIANLCVIKSVRRQGIASNMMSFAIEAAKSNGLTQVYVHVDRNNRPAQILYQKMGFEASQNGQLRQQSKPLPIKGHVSREGFRLIWDYWKYLRRHSYAKCRYKFRFRS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1468 333 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 213 299 IPR000182 GO:0016407
Gso15g1468 333 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 186 283 IPR016181 -
Gso15g1468 333 CDD NAT_SF 213 264 - -
Gso15g1468 333 Pfam Acetyltransferase (GNAT) family 148 281 IPR000182 GO:0016407
Gso15g1468 333 Gene3D - 111 314 - -
Gso15g1468 333 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 290 - -
Gso15g1468 333 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1468 Gso-Chr15 16923633 16933347 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso15g1468 Acetyltransf_1 2.9e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1468 - - gmx:100808675 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1468 15 16923633 16933347 Gso9g0585 9 6945830 6949222 GST
Gso13g0800 13 22320832 22322854 Gso15g1468 15 16923633 16933347 PCT
Gso17g0411 17 3761612 3763758 Gso15g1468 15 16923633 16933347 PCT
Gso15g1468 15 16923633 16933347 Gso13g0800 13 22320832 22322854 PCT
Gso15g1468 15 16923633 16933347 Gso17g0411 17 3761612 3763758 PCT