Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1454 ATGGAAGAAGACAAAGGCGTGGCAGACAAGAAAGTGACAAAGAACGAGGTGTTACTACGAATTTCAGACTCTGAAGAAGCCATGCATGCTGAGAAGGATCAAAGAGAGTCTAGAAGTTCCCTAGAAGCTGAAAGCAGTTCCCTTTCTCCTCAGCACAGCACCCACATAGGTAAAGGGTTTACAGATTCTCATGGTGAACTCACAGAGCTTGAGAATCTAAGAAACAAAGGTCAAGTTTCCACAGAGTTGGTGACAACTACAAAGAGGTTGATGGGTCGATCGGAATTTTCGAGGCCAAAGTCCAGAATGGTGGAGCCACCATGTCCAAAAGATGCAAACTTTGTTGAAGAACAGGCTCAAATGACAAGTTCCAATTCATCTGCATGGAATTCTCCCAACAAGAATGCTCCTGAAGCAACTATTGTTACCCCAAGAACCCCCTTGCCTGGGACTCCTGGGGAGGAAGAAGATGATGATGAAGAAGTGTACAAGACTGCACATGTTGAAATGAGGAAGAGATCTGGTAAGAAGTGTAGAGTATTGGGTTTTGTTGAGTGGTATGCTTTTGTTTGCATAATGGGGTTTTTAATTGCAAGCTTGACAGTTCATAAGTTGCAACATAGGGAAATCTGGGGTTTGGAACTGTGGAAATGGTGTGTGTTGGTGTCGGTTATACTATGTGGTAGACTGGTCACTGAGTGGTTTATCAATGTTCTGGTCTTCTTGATTGAGAGGAACTTCTTGTTTAAGAAGAAGGTCTTGTATTTTGTTTATGGTGTGCAGAAGAGTGTTCAGGGCTTTATATGGCTAAGTTTGGTTCTCTTGACATGGGTTCTGCTTTTCCACCACGGAGTGGAGAGAACCCGAAATGTTAGTAGGATTCTTAATTACATAACAAGGGCATTTGTTTCTTGTCTTATTGGAGCAGCTATATGGTTAGCCAAAACATTGTTCATAAAGCTGTTAGCTTCAAATTTTCAATCTACTAGATTTTTTGATAGGGTTCAAGAATCAATCTTTCATCAATATATTCTGAGGACACTTTCGGGTCTTCCCTTGATGAACATGTCTGCAAAAGTAGGCAAGACTTCAAGTAGTGGTCAACTCAGTTTTAAGACCATGATTAATGAGAATGAAGGGAAGGAAGAACAAGTCATTGATGTAGACAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTGGACTATGAAAGGGTTGATTGATGTGATAAGGAGTTCTGGGTTGTCTACCATCTCCTATACACCAGAGAGTGCCGATGAAGATGAGAGTGATCAGAAAGATAATGAAATTACTAGTGAGTGGGAGGCAAAGGCAGCTGCTTATAGAATTTTCAGGAATGTTGCCAAGCCAGGAAACAAGTATATTGAGAAGGATGACCTCTTGCGATTCATGAAAAATGAAGAAGTGGAAAATGTGCTTCCACTATTTGAAGGGGCAGTTGAGACAGGAAGAATTAAGAGGAAGTCTCTGAAGAACTGGCTGGTGAAAGTCTACCTTGAACGCCGATCACTTGTACATTCACTAAATGATACCAAAACTGCTGTTGATGACTTGAATATGCTTGCTTCTGTAATTGTGCTTATTGTGATCACTATTGTGTGGCTTCTTATAATGGGTTTCTTAAACACTCAAGTTCTTGTCTTTATTTCATCCCAGCTTTTACTTGTGGTTTTTATGTTTGGCAACACAGCTAAGACTGTATTTGAAGCTATTATATTTGTTTTTGTGATGCACCCATTTGATGTTGGTGATCGCTGTGTCATTGATGGTGTTCAGATGGTTGTGGAAGAGATGAACATACTAAGTACAATCTTTTTGAGATATGACAATGAGAAGATTTTCTATCCAAATTCAGTTCTGGCAACCAAGCCAATCAGTAACTTCTACAGGAGTCCAGAAATGAGTGATTCTGTTGAATTTGCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAAGACGAAGTTAAAAGCATATTTGGAGAGTAAGCCTCAACACTGGCGCCCCAACCACAGCGTATTGGTTAAGGATATTGAGAATGTAAATAAGATGAAAATGGCTTTTTATGTTACTCACACCATAAATTTTCAGAATTATGGGGATAAGAACAACCGAAGATCTGAATTAGTCCTGGAGTTAAAGAAAATTCTTGAAGATCTTAATATTAAATATCATCTGCTGCCCCAAGAAGTTCATCTCAGCCATGTAAGGTCATAA 2247 0.3952 MEEDKGVADKKVTKNEVLLRISDSEEAMHAEKDQRESRSSLEAESSSLSPQHSTHIGKGFTDSHGELTELENLRNKGQVSTELVTTTKRLMGRSEFSRPKSRMVEPPCPKDANFVEEQAQMTSSNSSAWNSPNKNAPEATIVTPRTPLPGTPGEEEDDDEEVYKTAHVEMRKRSGKKCRVLGFVEWYAFVCIMGFLIASLTVHKLQHREIWGLELWKWCVLVSVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVQKSVQGFIWLSLVLLTWVLLFHHGVERTRNVSRILNYITRAFVSCLIGAAIWLAKTLFIKLLASNFQSTRFFDRVQESIFHQYILRTLSGLPLMNMSAKVGKTSSSGQLSFKTMINENEGKEEQVIDVDKLKKMKQEKVSAWTMKGLIDVIRSSGLSTISYTPESADEDESDQKDNEITSEWEAKAAAYRIFRNVAKPGNKYIEKDDLLRFMKNEEVENVLPLFEGAVETGRIKRKSLKNWLVKVYLERRSLVHSLNDTKTAVDDLNMLASVIVLIVITIVWLLIMGFLNTQVLVFISSQLLLVVFMFGNTAKTVFEAIIFVFVMHPFDVGDRCVIDGVQMVVEEMNILSTIFLRYDNEKIFYPNSVLATKPISNFYRSPEMSDSVEFAVDVSTSIESIGALKTKLKAYLESKPQHWRPNHSVLVKDIENVNKMKMAFYVTHTINFQNYGDKNNRRSELVLELKKILEDLNIKYHLLPQEVHLSHVRS* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1454 748 MobiDBLite consensus disorder prediction 1 40 - -
Gso15g1454 748 Gene3D - 587 636 IPR023408 -
Gso15g1454 748 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 11 745 - -
Gso15g1454 748 PIRSF Memb_At2g17000 1 748 IPR016688 -
Gso15g1454 748 MobiDBLite consensus disorder prediction 73 92 - -
Gso15g1454 748 MobiDBLite consensus disorder prediction 122 159 - -
Gso15g1454 748 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 11 745 IPR016688 -
Gso15g1454 748 MobiDBLite consensus disorder prediction 122 140 - -
Gso15g1454 748 MobiDBLite consensus disorder prediction 1 108 - -
Gso15g1454 748 Pfam Mechanosensitive ion channel 529 733 IPR006685 GO:0016020|GO:0055085
Gso15g1454 748 SUPERFAMILY Sm-like ribonucleoproteins 577 636 IPR010920 -
Gso15g1454 748 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1454 Gso-Chr15 16625142 16628914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1454 86 744 Mechanosensitive Ion Channel Family AT5G12080 53.233 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1454 K22048 - gmx:100777332 1426.77