Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1429 ATGCTTACGTGCATAGCACGTCCGAAGAAACCCGGTGGCGACTCGGCAAGCGACGATCCGAGTTCGCGGAGCCAGCAGGGAGTGAAGTCGCTGACGTGTCAGCTGAAGGAGATGGCGCTGAAGGCGTCGGGAGCGTACAAGCAGTGCGGCCCGTGCGCGACGGCGCCGAGTAGGCCGAGTCGCAGCGGAACCGAGTCGGACTCGGAGTCGTCGTCGTCCCGGCGGCGGTGGGGGAAGGAGCTGGAGGCGCGGCTGAAGGGGATATCGAGCGGGGAAGGGACGCCGAGCTCGAGCGGGAGGAGGGTGGTGATGCTGCTCGAGGACGAGGAGGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATCTCCTTTGTGTCGCTTCCACGTGGCGGGAACCATCTCAAACGGATACGATTCAGTCGCGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTGATGGAACTTTACAATGTTCAAAGGCTTGATCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGTTCAAAGCGTGAATCAATAGAAGATTTCCCAGTGACACCTCCACTGAGCAGGGAAAGGCCACCTTGTAATCTATACCGTGCCGGGGGAAGAGGAGGAGGAGGCATGGGAATGGGGTACTCATCCTCAGATTCCTTTGATCACACCTCAATGCAATCATCCCGGCATTACTATGACCCCAATGGTGTGAACTCAACCCCAAAGGCTTCCACCATTAGTGCTGCTGCAAAGACAGATATCTCATCAATAATGGATGCTGATGCTTCCATAAGAAGTAGTTCATCCAGGGAAGCTGATCGCTCTGGGGATCTTTCAATCAGCAATGCCAGTGACTTTGACAATGAATGGGTTGAGCAGGATGAGCCTGGGGTTTACATCACCATCAGAGCTCTCCTGGGTGGCAAAAAGGAGCTCAGACGAGTCAGGTTCAGTCGAGAAAAGTTTGGGGAGATGCATGCTAGACTATGGTGGGAAGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1074 0.5466 MLTCIARPKKPGGDSASDDPSSRSQQGVKSLTCQLKEMALKASGAYKQCGPCATAPSRPSRSGTESDSESSSSRRRWGKELEARLKGISSGEGTPSSSGRRVVMLLEDEEEPKEWVAQVEPGVLISFVSLPRGGNHLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRLDRQAFPLPTPPRSEDESSKRESIEDFPVTPPLSRERPPCNLYRAGGRGGGGMGMGYSSSDSFDHTSMQSSRHYYDPNGVNSTPKASTISAAAKTDISSIMDADASIRSSSSREADRSGDLSISNASDFDNEWVEQDEPGVYITIRALLGGKKELRRVRFSREKFGEMHARLWWEENRARIHEQYL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1429 357 Pfam Transcription factor regulating root and shoot growth via Pin3 302 356 IPR013591 -
Gso15g1429 357 Pfam Transcription factor regulating root and shoot growth via Pin3 113 167 IPR013591 -
Gso15g1429 357 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 357 - -
Gso15g1429 357 MobiDBLite consensus disorder prediction 1 30 - -
Gso15g1429 357 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 357 IPR044532 -
Gso15g1429 357 MobiDBLite consensus disorder prediction 177 211 - -
Gso15g1429 357 Pfam Transcription factor BRX N-terminal domain 26 52 IPR027988 -
Gso15g1429 357 MobiDBLite consensus disorder prediction 48 77 - -
Gso15g1429 357 ProSiteProfiles BRX domain profile. 302 357 IPR013591 -
Gso15g1429 357 ProSiteProfiles BRX domain profile. 113 168 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1429 Gso-Chr15 15972246 15980143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1429 1 357 Major Intrinsic Protein MIP AT1G31880 42.674 4.07e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1429 - - gmx:100791360 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0785 13 22187030 22192675 Gso15g1429 15 15972246 15980143 PCT
Gso17g0427 17 3883670 3889540 Gso15g1429 15 15972246 15980143 PCT
Gso15g1429 15 15972246 15980143 Gso13g0785 13 22187030 22192675 PCT
Gso15g1429 15 15972246 15980143 Gso17g0427 17 3883670 3889540 PCT