Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1422 ATGGAGGAAATAACTTCGACGGTTGCAGTGCCATTCACACTTGGGAATTTAATACAAAAGGAGCAAGCAGTGACAACCCACATGGAGATAACTGGTCTCAAACTCAGGGCAAATACATCATCATCTTTGATATTTAATCCTGCAGTTGAAAGTGAAAAGCACACAGATATTGGGCCACAAACCCAAATTGAAGTGTCTTCAGAGGCAAAGGAGAATCCCGTTGGAGCTGGCCTTGTCTCAGAAATGGTTAGTCAAGGAGACAATAATGGTTTATATTCTGAAAGTCTAAATCAGGCAATAAAAGAGAATGAATCATTGTTAGTTAAGGATTCTCAGTGTGATCGGCATATCTCTCAATCTGCTGCTGGTGGCAAAAGTAGTCCTTGTAGGGAGGAATCTTCTGTTTTGAGGACTAATTGTGAAAGAAATTCACCTATTATCATCAAGGTTGATGATAACATAATTGATGGAAAGTCTGGTTCGACCAAGCTGCCACATGCTAGGGAACATGAAAGTGATGATGGAAGTGGATCAGATGAGTCTAATAAGAAAACATTTGATGTGCGTTGTGAGATGCCTGAGAAGCCAACATGCTTGGAATTGAGTGGTAATACTACTAGTACTACCCCACTTTGGGGTTGCTCATCAGTTTGTGGAAGGAGAAAGGAGATGGAAGATGCTATTGCTGTTAAGCCTCACCTTTTTCAAGTCACTTCAAGGATGTTAATGGATGATCATGTGAGTGAAAACACAAAATACTCACCAGTCCACTTTTTTGGTGTCTATGATGGACATGGCGGCATTCAGGTTGCCAATTACTGTCGGGAACATCTTCATTCAGTGTTGGTTGATGAGATAGAAGCTGCAAAGTCAACTTTGGATGGAAAGAAAGAGATGGACAACTGGGAGGAGCAATGGAAAAAAGCATTCTCCAATTGCTTTCACAAAGTGGATGATGAGGTTGGAGGAGTTGGTGAAGGTAATGGTGTTAGTGTTGAACCTCTTGCTTCTGAGACTGTTGGCTCCACTGCTGTAGTTGCCATTTTGACTCAAACACACATAATAGTTGCAAACTGTGGAGATTCAAGAGCTGTCTTGTGTCGCGGAAGAGAAGCATTGCCATTGTCTGATGATCACAAACCAAATAGAGACGATGAATGGGAAAGGATAGAAGCTGCAGGGGGAAGGATCATACAATGGAATGGGTACCGAGTTCTAGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGGTACTTGAAACCGTGGGTAATTCCAGAGCCAGAAGTGAGGTGTCTCCAATTAGACAAAAACGACGAATGCCTCATTCTGGCCAGTGATGGTTTATGGGATGTCATGACAAACGAAGAAGCCTGTGACATTGCACGAAAGCGAATCCTTCTTTGGCATAAGAAGAATGGCAACAACTCATCATCAGAACAAGGTCAAGAAGGAGTTGATCCTGCAGCTCAGTATGCCGCAGAGTATCTTTCTAGACTTGCCCTCCAAAGAGGAACCAAAGATAACATCTCTGTCATTGTTGTAGACTTGAAGCCTCAGAGAAAAATCAAGAAAAAAGAATAA 1584 0.423 MEEITSTVAVPFTLGNLIQKEQAVTTHMEITGLKLRANTSSSLIFNPAVESEKHTDIGPQTQIEVSSEAKENPVGAGLVSEMVSQGDNNGLYSESLNQAIKENESLLVKDSQCDRHISQSAAGGKSSPCREESSVLRTNCERNSPIIIKVDDNIIDGKSGSTKLPHAREHESDDGSGSDESNKKTFDVRCEMPEKPTCLELSGNTTSTTPLWGCSSVCGRRKEMEDAIAVKPHLFQVTSRMLMDDHVSENTKYSPVHFFGVYDGHGGIQVANYCREHLHSVLVDEIEAAKSTLDGKKEMDNWEEQWKKAFSNCFHKVDDEVGGVGEGNGVSVEPLASETVGSTAVVAILTQTHIIVANCGDSRAVLCRGREALPLSDDHKPNRDDEWERIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVRCLQLDKNDECLILASDGLWDVMTNEEACDIARKRILLWHKKNGNNSSSEQGQEGVDPAAQYAAEYLSRLALQRGTKDNISVIVVDLKPQRKIKKKE* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1422 527 CDD PP2Cc 213 517 IPR001932 -
Gso15g1422 527 MobiDBLite consensus disorder prediction 162 183 - -
Gso15g1422 527 SMART PP2C_SIG_2 242 517 IPR001932 -
Gso15g1422 527 Gene3D - 202 527 IPR036457 -
Gso15g1422 527 ProSiteProfiles PPM-type phosphatase domain profile. 211 517 IPR001932 -
Gso15g1422 527 SMART PP2C_4 201 515 IPR001932 -
Gso15g1422 527 Pfam Protein phosphatase 2C 215 510 IPR001932 -
Gso15g1422 527 ProSitePatterns PPM-type phosphatase domain signature. 258 266 IPR000222 GO:0043169
Gso15g1422 527 MobiDBLite consensus disorder prediction 151 183 - -
Gso15g1422 527 PANTHER ALPHABET, ISOFORM E-RELATED 107 527 - -
Gso15g1422 527 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 107 527 - -
Gso15g1422 527 SUPERFAMILY PP2C-like 198 519 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1422 Gso-Chr15 15834850 15838949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1422 208 526 PP2C-type Phosphatase Gene Family AT4G26080 60.615 7.03e-135 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1422 K14497 - gmx:100812974 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1422 15 15834850 15838949 Gso9g0561 9 6425260 6429418 GST
Gso13g0772 13 22059903 22063481 Gso15g1422 15 15834850 15838949 PCT
Gso17g0439 17 3977681 3981155 Gso15g1422 15 15834850 15838949 PCT
Gso15g1422 15 15834850 15838949 Gso13g0772 13 22059903 22063481 PCT
Gso15g1422 15 15834850 15838949 Gso17g0439 17 3977681 3981155 PCT