Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1419 ATGGAGAATCAGAAGGTGGGGGAATCGGTGCATGTGAGGGAGGAGGAGGATGACGTGGCGGTGGAGAAAGAGGAGGATCATGGAGATGTTGGTTCCAGCATGACCTTGGAGAGGGTCGCTGCAGCTAAGAAATTCATTGAGAATCATTACAAGTCTCAGAGGAAGCACATCCAAGAACGCAAGGAGAGGCGGTTAATGCTAGAAAAGAAGTTAGCGTCTTCTCAAGCACCAGAAGAGGAACAGATCAATCTATTGAAGGATTTAGAGCTCAAGGAAACTGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGGGAGGTAAGACTCTGTCGGGAAAAGAAATCAGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCCTGTGACTGCATTGTGAAACTCTATTACTCTTTTCAAGATGCTGAACACTTATATCTCATAATGGAATATTTGCCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACGTTGACTGAAACTGTGGCTAGATTTTACGTTGCCCAAAGCGTTATTGCCATAGAGTCTATTCATAAACATAACTACATTCATCGAGATATAAAACCTGACAACCTTCTATTGGACCAATATGGTCACATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAGTCTATCATCTATTAGTGAAAATGAAATCCTGGATGATGAGAACTTGAATGATACCACGGATGTTGATGGAGCCTTGTCAAATGGCAGAAATGGCAGGCGCTGGAAAAGTCCCCTTGAGCAACTTCAACATTGGCAAATTAACAGGAGGAAGTTGGCATTTTCCACGGTTGGAACTCCAGACTATATTGCTCCTGAAGTACTACTGAAAAAGGGTTATGGTGTAGAGTGCGACTGGTGGTCTCTTGGTGCTATAATGTACGAAATGCTAGTTGGATATCCTCCGTTTTACTCTGATGATCCTGTATCAACATGCAGAAAGATTGTGCATTGGAAAAATCACTTAAAATTTCCAGAGGAGGCCAGATTGACACCTGAAGCCAAGGATCTAATATGCAAGTTGCTTTGTGGTGTTCCACATAGGCTTGGTACTAGAGGAGCAGAAGAAATTAAAGCACATCCTTGGTTCAAAGATGTCATGTGGGACAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGAACAACCAAAATCAAGTAGATCTGGATCTGGACCATTCAGAAAGAAGCTCTTAACTTCTCAAGATCTTAGTTTTGTTGGTTATACTTACAAGAATTTTGCTGCTGTCAAGGGGATGATGCGTCAATCTATTAATGATCCAGGGAGCTTGTCACCAAAGCGGACATCTGTTGATTCCACGCACAGTGATTCTGGAGTAAACTATTCCGCTTGA 1560 0.4179 MENQKVGESVHVREEEDDVAVEKEEDHGDVGSSMTLERVAAAKKFIENHYKSQRKHIQERKERRLMLEKKLASSQAPEEEQINLLKDLELKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVACDCIVKLYYSFQDAEHLYLIMEYLPGGDIMTLLMREETLTETVARFYVAQSVIAIESIHKHNYIHRDIKPDNLLLDQYGHMKLSDFGLCKPLDCSSLSSISENEILDDENLNDTTDVDGALSNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVSTCRKIVHWKNHLKFPEEARLTPEAKDLICKLLCGVPHRLGTRGAEEIKAHPWFKDVMWDRLYEMEAAFKPQVNGELDTQNFMKFDEVEQPKSSRSGSGPFRKKLLTSQDLSFVGYTYKNFAAVKGMMRQSINDPGSLSPKRTSVDSTHSDSGVNYSA* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1419 519 Gene3D Transferase(Phosphotransferase) domain 1 194 432 - -
Gso15g1419 519 SMART serkin_6 108 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1419 519 Pfam Protein kinase domain 110 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1419 519 Pfam Protein kinase domain 308 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1419 519 MobiDBLite consensus disorder prediction 1 32 - -
Gso15g1419 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 518 - -
Gso15g1419 519 CDD STKc_NDR_like 106 480 - -
Gso15g1419 519 MobiDBLite consensus disorder prediction 1 35 - -
Gso15g1419 519 Gene3D Phosphorylase Kinase; domain 1 99 193 - -
Gso15g1419 519 ProSiteProfiles Protein kinase domain profile. 108 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1419 519 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 16 518 - -
Gso15g1419 519 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Gso15g1419 519 SMART pkinase_C_6 416 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso15g1419 519 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso15g1419 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Gso15g1419 519 SUPERFAMILY Protein kinase-like (PK-like) 91 460 IPR011009 -
Gso15g1419 519 MobiDBLite consensus disorder prediction 494 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1419 Gso-Chr15 15777487 15788965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1419 1 518 AGC Kinase Gene Family AT2G19400 73.755 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gso15g1419 Pkinase 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1419 K08790 - gmx:100811359 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1419 15 15777487 15788965 Gso9g0558 9 6381262 6392242 GST