Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1397 ATGTTGTGTTTGGAAATTGGTGTGGAGATGAGGGTGGTTTTATCACTGATTTTGCAGCTGGTGAAGCTCTGCATCATTGGCTTTGCTGTTGCATTCCATGGATCTGAAGGGTCTGCTATATCCCCATCTCCAGGATTCCTTCCAATCATTCATCCTAGTGGAGAAGCACCTGCTCCCATCCATCATGGATTGTCATGGGAAAGCAGTCCTCCAAAATCACCTTCAGATACAAACGGGTTTGGTATATCCCCATCTCCTGAAATAATACCTGTGGATCCTTCCCCCAGTGAATCACCTGGTACTTTACACCCAAGAGAACCATGGAGAACTGTTGCACCAATCCCTCCAGAAGTACCAAATGTGTCATTCTTGCCCCCTCTAGTTACTACATTACCACCTCTTACATCAGCTCCAACTCCTCAGAAGATAAAAGGATTTGAACCATCTATATCTCCTAGTCCTAGTACAAGCACCATAGCATCATCACCACCGGCACCATATAATGATGCTCATGCACCATCAACTGCTGAAGGGAATGTGCCACCATCCATACAACCAAGTCCGTCTCAAAGCAAAACAACACCTGCTATTAGGCCTCCTGTATCCACACCAATTGCTCCAGCTCCAATTCCAATACCTTCTGGCAATTTGCCAAAAACTTCACCTATCAGCCAACCAATTGAACATGGAAGCTTGCCTCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCAGAACCAGCTTTGCCAGCACTAGTTCCAATGCCTTCTACCAAATTGCCCAAAATTTCACCAGTAAGCCAAGCCACTGAAAATGGAAGTTTGCCTCATAGAGAGGGTGAAAATAATGGTCACATACCAGAGCCAATTTCACCAGCCCCTATAGTATTCAGTTTTCCCGAACATTCACCAGTGAGTCAGCCAACTGAACATGGAAGTTTGCCTCCAATTGACCCCAGAAGGAATATCAACCCTGGTCACACATTGGAGCCAGTTTCCCAAGCCCCAGTTGCAATGCCTCCTGCAAATTTGCCAAAATATTCATCAGTCAGTCAACCAACTCATCATGGAAATTCCCCACCTGATGTTCAAAATAGAACTGCAAATAATGGTCACAGTCACACCCCAGCACCAGAAATGCCACCACCTGTTGTCTCTCCTGCATTGACTCCTTCCAGAAGCTTTGGTTGGAAAAAAAGTGGAGAACCAGTTTCTGCACCTGTGTATGAAACACCAAAGCCACCACCAACTATAGTACATTCCCATGCTCAAGCACCTGTTGTCTCTCCTGCATTAACACCTTCTAGAAGCTTCAATTGGACAAAAGGTGGAGAACCAGTTTCTGCACCTCCGTACAAAATACCAAAGCCACTACCAGCTATAGTACATTCCCCTGCTCAAGAAAGACAATTTCACCATGCTCCTGAGCCACTGATTTCATCTCCCAAATCTCCTTTCAACAAAGATCATCCTCCTGCATCTTCACCTTCAACCACATTCTATAAGCATCACTATACAAGGAACACAGTCACCAGCCCTGCTCCTGCATCATCACATTTTGTTTCTCCTTCCACTTCAAAACACCAAGATGGATCAAATCCTCCCTCGCCGCTGCCAACAAGTGGGCAAAGACATCATGCTCCACTACCAATGAACACAGGTTCCTCGGTTTCCCCATCTTCCCTCCATATTCAGTCACCAGTGAACCAGGTTTCACCTGCTCCTTCTCCGATATTCAACATATCCCCCCACTCAACCAAAATTCCATTGCATCCTCCTAAAGTGTCTCCTTCTCGGCCTTCTTCCAAGATCCCTAAGAAGCCAGTCCGGCCTCGTTTTCAAGCACTGCCACCCCCACCTCCAAATGAAGATTGTATATCAGTGGTTTGCTCAGAACCCTATACAAGTACTCCACCTGGAGCACCTTGCAAATGTGTGTGGCCCATGGAAGTTGGTCTTCGCCTTAGTGTTTCTCTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCACTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCTGATGCAGCAAACCAGCAACCTGATAAAACTATTGTATTCATTGACTTGGTACCACTTGGGGAAGAATTTGATAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAAGTGGTTATAAAGACTTCTTACTTTGGTGATTATGTCGTGTTGTATGTGACCTATCCAGGTTTGCCTCCATCTCCTCCTTTACCTCCTTCAAGCATTTCCATAATCGATGGTGGTCCGTATTCGGGTGGTGGCAATAATGGTAGGACAATAAAGCCCCTTGGGGTTGACATATCAAAGAGACAGCATAGAGGTGGACTTAGCAAGGGCATAATTGCTGTCATTGCTCTTTCAGTTTTTCTAGTAGTTGCTTTATGCTTTGCTGCTGCTTTGGCATCGTTCAAGTACAGAGATCATGTGAGTCAAACACCTTCAACCCCACGGATTTTACCTCCTCTTACCAAAGCACCAGGTGCTGCTGGATCAGTAGTTGGCGGTGGGCTTGCTTCAGCTTCGACATCATTTCGATCTAGCATTGCTGCTTACACAGGATCTGCTAAGACTTTAAGCATGAATGACATTGAGAAAGCCACGGATAATTTCCATGCTTCCAGAGTACTTGGAGAAGGTGGTTTTGGGCTTGTTTATAGCGGTATACTTGAAGATGGGACAAAAGTTGCTGTCAAGGTTCTAAAAAGAGAGGATCATCAAGGCAACCGTGAATTCCTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAACTTGGTTAAGTTGATTGGTATATGCGCAGAGGTCAGCTTCCGCTGTTTAGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGCTGACAAGGAAAACAGCCCACTTGATTGGAGTGCTCGGTTAAAGATAGCTCTTGGTTCTGCTCGTGGACTGGCTTATCTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGACTTCAAGTCTAGCAATATTTTGCTGGAAAATGATTTTACACCAAAAGTATCCGATTTTGGATTGGCCCGAACAGCAGCTGATGAGGGGAACAGACACATATCAACACGAGTGATGGGAACTTTCGGTTATGTGGCCCCAGAGTATGCAATGACTGGACATCTTCTTGTGAAGAGCGATGTTTACAGTTATGGTGTTGTCCTCCTTGAGCTTTTGACTGGAAGAAAACCGGTGGACATGTCACAACCTCCTGGTCAAGAAAATCTCGTTGCATGGGCTCGTCCACTACTCTCAAGCGAAGAAGGATTGGAAGCAATGATAGATCCATCTCTTGGACCTGATGTGCCTTCTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTGTCGGACCGTCCTTTCATGGGGGAGGTTGTTCAGGCTCTAAAACTTGTGTGCAATGAATGTGATGAGGCAAGAGAAACAGGTTCAAGCTCTAGCTCTGTTGATTTGAGTCATTCTAGACAACTATCAGATAATTTACAAGGCCAATTCTCAGCCACTAACTATGATTCTGGAGTTGATATTGAAAATGGGTTGTTAGCATCAGAGTTATTCAGCTCATCAGCGAGATATGGAAGGCGAGTGTCCGGATCATTTAGAAGGCATTCTTATTCAGGTCCTCTAAATACTGGAAGAAGCAAGCGGTTGTGGCAGATAATTAGAAAGCTTTCTGGGGGTAGTGTCAGTGAACATGGAACTATGTTTAAGTTATGA 3813 0.4485 MLCLEIGVEMRVVLSLILQLVKLCIIGFAVAFHGSEGSAISPSPGFLPIIHPSGEAPAPIHHGLSWESSPPKSPSDTNGFGISPSPEIIPVDPSPSESPGTLHPREPWRTVAPIPPEVPNVSFLPPLVTTLPPLTSAPTPQKIKGFEPSISPSPSTSTIASSPPAPYNDAHAPSTAEGNVPPSIQPSPSQSKTTPAIRPPVSTPIAPAPIPIPSGNLPKTSPISQPIEHGSLPPKIDERNKSHKPEPALPALVPMPSTKLPKISPVSQATENGSLPHREGENNGHIPEPISPAPIVFSFPEHSPVSQPTEHGSLPPIDPRRNINPGHTLEPVSQAPVAMPPANLPKYSSVSQPTHHGNSPPDVQNRTANNGHSHTPAPEMPPPVVSPALTPSRSFGWKKSGEPVSAPVYETPKPPPTIVHSHAQAPVVSPALTPSRSFNWTKGGEPVSAPPYKIPKPLPAIVHSPAQERQFHHAPEPLISSPKSPFNKDHPPASSPSTTFYKHHYTRNTVTSPAPASSHFVSPSTSKHQDGSNPPSPLPTSGQRHHAPLPMNTGSSVSPSSLHIQSPVNQVSPAPSPIFNISPHSTKIPLHPPKVSPSRPSSKIPKKPVRPRFQALPPPPPNEDCISVVCSEPYTSTPPGAPCKCVWPMEVGLRLSVSLYTFFPLVSEFASEIATGVFMKQSQVRIMGADAANQQPDKTIVFIDLVPLGEEFDNTTAFLTSERFWHKQVVIKTSYFGDYVVLYVTYPGLPPSPPLPPSSISIIDGGPYSGGGNNGRTIKPLGVDISKRQHRGGLSKGIIAVIALSVFLVVALCFAAALASFKYRDHVSQTPSTPRILPPLTKAPGAAGSVVGGGLASASTSFRSSIAAYTGSAKTLSMNDIEKATDNFHASRVLGEGGFGLVYSGILEDGTKVAVKVLKREDHQGNREFLSEVEMLSRLHHRNLVKLIGICAEVSFRCLVYELIPNGSVESHLHGADKENSPLDWSARLKIALGSARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEGNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLSSEEGLEAMIDPSLGPDVPSDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEARETGSSSSSVDLSHSRQLSDNLQGQFSATNYDSGVDIENGLLASELFSSSARYGRRVSGSFRRHSYSGPLNTGRSKRLWQIIRKLSGGSVSEHGTMFKL* 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1397 1270 Gene3D Phosphorylase Kinase; domain 1 860 963 - -
Gso15g1397 1270 MobiDBLite consensus disorder prediction 178 198 - -
Gso15g1397 1270 CDD STKc_IRAK 894 1162 - -
Gso15g1397 1270 MobiDBLite consensus disorder prediction 261 277 - -
Gso15g1397 1270 MobiDBLite consensus disorder prediction 60 113 - -
Gso15g1397 1270 Gene3D Transferase(Phosphotransferase) domain 1 964 1186 - -
Gso15g1397 1270 ProSitePatterns Protein kinases ATP-binding region signature. 894 916 IPR017441 GO:0005524
Gso15g1397 1270 MobiDBLite consensus disorder prediction 457 618 - -
Gso15g1397 1270 MobiDBLite consensus disorder prediction 134 420 - -
Gso15g1397 1270 MobiDBLite consensus disorder prediction 68 82 - -
Gso15g1397 1270 MobiDBLite consensus disorder prediction 146 164 - -
Gso15g1397 1270 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 445 1270 - -
Gso15g1397 1270 Pfam Protein tyrosine and serine/threonine kinase 890 1161 IPR001245 GO:0004672|GO:0006468
Gso15g1397 1270 MobiDBLite consensus disorder prediction 200 216 - -
Gso15g1397 1270 PANTHER OS01G0750732 PROTEIN 445 1270 - -
Gso15g1397 1270 ProSiteProfiles Protein kinase domain profile. 888 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1397 1270 SUPERFAMILY Protein kinase-like (PK-like) 869 1161 IPR011009 -
Gso15g1397 1270 MobiDBLite consensus disorder prediction 487 583 - -
Gso15g1397 1270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1010 1022 IPR008271 GO:0004672|GO:0006468
Gso15g1397 1270 MobiDBLite consensus disorder prediction 345 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1397 Gso-Chr15 15293241 15303775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1397 332 1266 Receptor kinase-like Gene Family AT5G56890 52.994 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso15g1397 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1397 - - gmx:100802309 2384.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1397 15 15293241 15303775 Gso9g0535 9 5983232 5993559 GST