Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1388 ATGCCTCTCCGAGTACTCCAAGAGGCTACTTCACCCTCTAATGAGTCACATGCACCACAGCATAAATCCGGATCATCATTGTTTTACATCCTCGGAGGACTAGTTGTGCTCGCCATAGTGTTGATTTTTTTGTATGTAGTTTGGAAGCGAATTAAACGGCCAGCACAGACGATGACAGTTGCAAGTAAAGAGCATCAAGAGTTTGGGAAACATAATGAATCGGCAGAGGTGATGAAGATGATATTTTCATCTAATCAACAGTCAGGGTCCAAGGAGTTCTTTAGTGGGAACCTTCGGACTATTAGCTGCTTTGACTACCAGACATTGAAGAAAGCAACCGAGAATTTCCATCCTGATAATCTTCTTGGAAGTGGTGGATTTGGACCTGTTTACCAGGGAAAGTTGGTAGATGGAAGGCTAGTTGCTGTCAAAAAATTGGCTCTCAACAAATCCCAACAGGGAGAAAAAGAATTTCTGGTAGAGGTGAGAACAATCACTAGTATCCAACACAAAAATCTGGTTCGCCTTCTCGGATGCTGCGTAGATGGGCCTCAAAGGTTACTTGTCTATGAATACATGAAGAACAGAAGTTTGGACCTCTTCATACATGGAAACAGTGATCAATTTCTGAATTGGAGCACTAGGTTCCAAATTATTCTGGGAGTAGCGCGAGGACTACAATACCTTCATGAGGATTCACACCAAAGAATTGTTCATCGAGACATCAAAGCCAGCAACATTCTTCTTGATGATAAGTTTCACCCAAGGATTGGAGACTTTGGGCTAGCAAGATTTTTCCCTGAAGACCAAGCTTATCTTAGCACGCAGTTCGCTGGAACTTTAGGTTATACAGCTCCTGAATATGCTATTAGAGGAGAATTGTCAGAAAAGGCAGATATCTATAGTTTTGGAGTTCTTGTGCTTGAAATAATTTGTTGCAGGAAAAACACAGAGCATACTTTGCCATCAGAAATGCAGTACCTCCCAGAATATGCATGGAAACTGTACGAGAATGCAAGGATATTGGACATTGTAGATCCAAAGCTGCGAGAACATGGATTCGTAGAAAAGGATGTTATGCAAGCAAACCATGTTGCTTTCTTATGTCTTCAGCCTCATGCACATTTGAGACCTCCCATGTCAGAGATCGTGGCATTGTTGACATTCAAAATTGAAATGGTTACAACACCAATGAGGCCAGCCTTCCTCGATCGAAGGCCGAGAAAGGATGATGAAAACCACCCTTTGGAGGCATTATCCCAGGGTTTCACATCTCCCATATATCTAAAAGCATCTGATTGA 1302 0.4217 MPLRVLQEATSPSNESHAPQHKSGSSLFYILGGLVVLAIVLIFLYVVWKRIKRPAQTMTVASKEHQEFGKHNESAEVMKMIFSSNQQSGSKEFFSGNLRTISCFDYQTLKKATENFHPDNLLGSGGFGPVYQGKLVDGRLVAVKKLALNKSQQGEKEFLVEVRTITSIQHKNLVRLLGCCVDGPQRLLVYEYMKNRSLDLFIHGNSDQFLNWSTRFQIILGVARGLQYLHEDSHQRIVHRDIKASNILLDDKFHPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIICCRKNTEHTLPSEMQYLPEYAWKLYENARILDIVDPKLREHGFVEKDVMQANHVAFLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPRKDDENHPLEALSQGFTSPIYLKASD* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1388 433 Gene3D Transferase(Phosphotransferase) domain 1 193 396 - -
Gso15g1388 433 MobiDBLite consensus disorder prediction 7 21 - -
Gso15g1388 433 PANTHER RECEPTOR-LIKE KINASE 95 401 - -
Gso15g1388 433 Gene3D Phosphorylase Kinase; domain 1 78 192 - -
Gso15g1388 433 CDD STKc_IRAK 122 388 - -
Gso15g1388 433 SUPERFAMILY Protein kinase-like (PK-like) 96 390 IPR011009 -
Gso15g1388 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Gso15g1388 433 Pfam Protein tyrosine and serine/threonine kinase 120 385 IPR001245 GO:0004672|GO:0006468
Gso15g1388 433 MobiDBLite consensus disorder prediction 1 21 - -
Gso15g1388 433 SMART serkin_6 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1388 433 ProSiteProfiles Protein kinase domain profile. 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1388 433 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 95 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1388 Gso-Chr15 15112182 15116664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1388 104 403 Receptor kinase-like Gene Family AT1G56120 49.000 1.81e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g1388 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1388 - - gmx:100799624 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1388 15 15112182 15116664 Gso9g0528 9 5876077 5880409 GST
Gso17g0471 17 4253761 4257500 Gso15g1388 15 15112182 15116664 PCT
Gso15g1388 15 15112182 15116664 Gso17g0471 17 4253761 4257500 PCT