LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g1357	ATGCCACTTTCCTCTGTTTTCATTCTCCTCACCAATTTCCGCTTCTCTCCCGAGGCCGAGGTTTACATAGTCACCGTTGAGGGAGAGCCTATCATAAGCTACAAGGGAGGAATCGATGGCTTTGAAGCCACCGCGGTGGAATCTGATGATGATGATGATGAGAAGCTTGATTCCACAAGTGAGGTGGTGGTTTCTTATGCTCGGCACCTTGAAAAGAGACATGACATGCTTCTGGGGATGCTGTTTGAGCGTGGGACATACAACAAGCTCTATAGCTATAGACACCTTATAAATGGGTTTGCAGTTCATCTTTCCCCAGAACAGGCAGAAACTCTTAGACATGCTCCTGGGGTGAAATCTGTTGAGAGGGACTGGAAAGTGAAGAGGCTCACAACACACACCCCACAATTTTTGGGGCTTCCAACTGGGGTGTGGCCAACAGGAGGTGGCTATGAGAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATCTACCCTCACCATCCAAGTTTTACTACTCATAATACTGAACCGTATGGTCCAGTTTCGAGGTATAGAGGAAAATGTGAAGTTGATCCTGACACTAAAAGAAGTTTCTGTAATGGGAAAATTATTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTCAACCCTTCAATTGATTTTGATTCACCTCTTGATGGAGATGGGCATGGGAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCAGTGTACAAAGCACTCTATAGACTCTTTGGAGGATTTATTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTGCATGATGGGGTGGATATACTCAGCCTTTCAGTTGGACCAAATAGTCCTCCATCAAACACCAAAACTACATTTTTGAATCCTTTTGATGCTACACTTCTTGGAGCAGTGAAAGCTGGTGTGTTTGTTGCACAGGCTGCGGGAAATGGTGGTCCTTTTCCTAAGTCATTAGTTTCATATAGTCCATGGATAGCAACTGTAGCAGCAGCAATTGATGATCGTAGATATAAAAACCATCTGATCCTCGGAAATGGAAAAATCTTAGCCGGACTTGGATTGTCACCTTCTACACGTTTAAACCAAACATACACATTGGTTGCTGCAACTGATGTGCTTCTAGATTCTTCAGTTACGAAGTACAGCCCCACTGATTGCCAGAGACCAGAACTTTTAAATAAGAACTTAATAAAGGGAAATATTCTTCTCTGTGGCTATTCTTACAATTTTGTTATTGGTTCTGCATCAATAAAGCAAGTCTCAGAAACAGCAAAGGCCCTTGGAGCAGTTGGGTTTGTTCTTTGTGTTGAAAATGTTTCTCCTGGAACAAAATTTGATCCAGTCCCTGTTGGCATTCCTGGGATTCTTATCACAGATGCCAGCAAATCAAAGGAACTGATAGATTATTATAATATCTCCACACCAAGAGACTGGACTGGAAGGGTGAAGACTTTTGAAGGTACAGGTAAAATTGAGGACGGTTTGATGCCTATTCTCCATAAATCTGCACCACAAGTAGCAATGTTTTCGGCTAGAGGACCAAATATAAAGGACTTTAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTCTCTAAATGGAACCGATGAGCCAAATTATGTTGGAGAGGGGTTTGCAATGATATCTGGGACTAGTATGGCTGCACCACATATAGCTGGAATTGCTGCTCTGATAAAGCAGAAACATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACATCGACCACTCTAGACAGAGCAGGAAATCCTATTCTAGCACAGCTATATTCTGAAACAGAAGCTATGAAGCTGGTCAAAGCCACTCCTTTTGATTATGGGAGTGGACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTCATGAGATAAAGAACTACACAAACTCCCCATGTAACAACACCATGGGCCACCCATCAAATCTAAACACTCCCTCCATTACAATTTCCCATCTAGTAAGAAGTCAAATTGTCACACGCACTGTGACAAATGTTGCTGATGAGGAAGAAACCTACGTGATCACAGCCAGGATGCAACCAGCAGTTGCCATTGACGTGAACCCTCCAGCAATGACCATCAAAGCCAGTGCATCGCGTAGGTTTACTGTGACACTCACTGTTCGCTCAGTGACAGGAACCTATAGTTTTGGAGAGGTGCTAATGAAGGGAAGCAGAGGGCACAAGGTGAGGATCCCTGTTCTGGCCAATGGATACTCAAGATAG	2460	0.4439	MPLSSVFILLTNFRFSPEAEVYIVTVEGEPIISYKGGIDGFEATAVESDDDDDEKLDSTSEVVVSYARHLEKRHDMLLGMLFERGTYNKLYSYRHLINGFAVHLSPEQAETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGYERAGEDIVIGFVDSGIYPHHPSFTTHNTEPYGPVSRYRGKCEVDPDTKRSFCNGKIIGAQHFAQAAIAAGAFNPSIDFDSPLDGDGHGSHTASIAAGRNGIPVRMHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVHDGVDILSLSVGPNSPPSNTKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKSLVSYSPWIATVAAAIDDRRYKNHLILGNGKILAGLGLSPSTRLNQTYTLVAATDVLLDSSVTKYSPTDCQRPELLNKNLIKGNILLCGYSYNFVIGSASIKQVSETAKALGAVGFVLCVENVSPGTKFDPVPVGIPGILITDASKSKELIDYYNISTPRDWTGRVKTFEGTGKIEDGLMPILHKSAPQVAMFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWSLNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPILAQLYSETEAMKLVKATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTPGIDVHEIKNYTNSPCNNTMGHPSNLNTPSITISHLVRSQIVTRTVTNVADEEETYVITARMQPAVAIDVNPPAMTIKASASRRFTVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR*	820

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso15g1357	819	Gene3D	-	692	816	-	-
	Gso15g1357	819	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	15	129	IPR037045	-
	Gso15g1357	819	CDD	PA_subtilisin_like	377	515	-	-
	Gso15g1357	819	Pfam	Fibronectin type-III domain	720	813	IPR041469	-
	Gso15g1357	819	Pfam	Subtilase family	155	637	IPR000209	GO:0006508\|GO:0008236
	Gso15g1357	819	ProSitePatterns	Serine proteases, subtilase family, serine active site.	598	608	IPR023828	-
	Gso15g1357	819	Pfam	Peptidase inhibitor I9	21	128	IPR010259	-
	Gso15g1357	819	Gene3D	-	370	535	-	-
	Gso15g1357	819	CDD	Peptidases_S8_3	131	634	IPR034197	-
	Gso15g1357	819	SUPERFAMILY	Subtilisin-like	130	679	IPR036852	GO:0004252\|GO:0006508
	Gso15g1357	819	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	160	171	IPR023827	-
	Gso15g1357	819	PANTHER	CUCUMISIN-RELATED	12	818	-	-
	Gso15g1357	819	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	12	818	IPR045051	-
	Gso15g1357	819	SUPERFAMILY	Protease propeptides/inhibitors	87	127	-	-
	Gso15g1357	819	PRINTS	Subtilisin serine protease family (S8) signature	155	174	IPR015500	-
	Gso15g1357	819	PRINTS	Subtilisin serine protease family (S8) signature	234	247	IPR015500	-
	Gso15g1357	819	PRINTS	Subtilisin serine protease family (S8) signature	597	613	IPR015500	-
	Gso15g1357	819	Gene3D	Peptidase S8/S53 domain	157	688	IPR036852	GO:0004252\|GO:0006508
	Gso15g1357	819	ProSiteProfiles	Serine proteases, subtilase domain profile.	124	675	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g1357	Gso-Chr15	14357764	14364076	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso15g1357	6	819	Subtilisin-like Serine Gene Family	AT4G30020	79.755	0.0	1347

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso15g1357	-		-	gmx:100784999	1583.54

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso15g1357	15	14357764	14364076	Gso9g0499	9	5351549	5358234	GST
	Gso13g0720	13	21480726	21487817	Gso15g1357	15	14357764	14364076	PCT
	Gso17g0500	17	4545956	4553779	Gso15g1357	15	14357764	14364076	PCT
	Gso15g1357	15	14357764	14364076	Gso13g0720	13	21480726	21487817	PCT
	Gso15g1357	15	14357764	14364076	Gso17g0500	17	4545956	4553779	PCT