Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1336 ATGGAGGGTCAACCTGCTAAACGCAGACGTGTGTACTCTCTTGAACCCAACAAAGTGGAACAAGCAGCATTTGCCAGAAACTACATGAACTATTTGGTGCCAGCATTGATGAAGATCAAGGAAAGAAGCACTTCATCAGATCAACATAGTGGCCATTGTGATGACAATATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGCACTCAGCCCAAGGTTTTGCATGGAGTAATGCTCTAAGTGTGAAGCTTCAAAGAGATAGAGTCAATGTAGATTGTGACACCACTAGCTTTGGTGAAGGTTCATCATCATCAAGGGTTTGTGGCCAAAATTGTGAAATGGTGCCGTTGGATAATTTCCCTTCAAACCCTAGTTTGAAATCTAATAACAAGTGCAAGGAAATGCCTGAAATGAAAAGGGGTTTGAGAGAAGATGATGATGGTGATGATGAAGATGAAGATGAAGTCATCAATGGTCAATTGAAGAGCCTAAGAAGGTTGATGCCGGGTGGAGAAGAGATGTGTAGTGAACAAATGGTGACAGAACTACAAAGCTATGTAAGCTGTTTGCAAATGCAGGTGAACATTCTTCGGTGCCTCGCGGAGACACATTGA 621 0.4235 MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALMKIKERSTSSDQHSGHCDDNIQNVVKYEVDMAMVHSAQGFAWSNALSVKLQRDRVNVDCDTTSFGEGSSSSRVCGQNCEMVPLDNFPSNPSLKSNNKCKEMPEMKRGLREDDDGDDEDEDEVINGQLKSLRRLMPGGEEMCSEQMVTELQSYVSCLQMQVNILRCLAETH* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1336 206 MobiDBLite consensus disorder prediction 121 156 - -
Gso15g1336 206 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 205 IPR044660 GO:0006355
Gso15g1336 206 CDD bHLH_AtIBH1_like 159 203 IPR044549 GO:0006355
Gso15g1336 206 PANTHER TRANSCRIPTION FACTOR BHLH146 3 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1336 Gso-Chr15 14017735 14018855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1336 7 86 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 47.500 1.17e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1336 - - gmx:100805301 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1336 15 14017735 14018855 Gso9g0478 9 5040154 5041452 GST
Gso13g0707 13 21284792 21286246 Gso15g1336 15 14017735 14018855 PCT
Gso17g0517 17 4715179 4716683 Gso15g1336 15 14017735 14018855 PCT
Gso15g1336 15 14017735 14018855 Gso13g0707 13 21284792 21286246 PCT
Gso15g1336 15 14017735 14018855 Gso17g0517 17 4715179 4716683 PCT